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  5. Brara.I01413.1

Brara.I01413.1


Description : subgroup ERF-III transcription factor


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I01413.1
Cluster HCAA Clusters: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
A4A49_06467 No alias ethylene-responsive transcription factor crf4 0.03 Orthogroups_2024-Update
A4A49_15668 No alias ethylene-responsive transcription factor rap2-12 0.04 Orthogroups_2024-Update
A4A49_16905 No alias ethylene-responsive transcription factor 5 0.03 Orthogroups_2024-Update
At1g71450 No alias Ethylene-responsive transcription factor ERF021... 0.03 Orthogroups_2024-Update
At2g20880 No alias Ethylene-responsive transcription factor ERF053... 0.04 Orthogroups_2024-Update
At2g31230 No alias Ethylene-responsive transcription factor 15... 0.03 Orthogroups_2024-Update
At2g40220 No alias Ethylene-responsive transcription factor ABI4... 0.03 Orthogroups_2024-Update
At3g23220 No alias Ethylene-responsive transcription factor ERF095... 0.03 Orthogroups_2024-Update
At5g18560 No alias PUCHI [Source:UniProtKB/TrEMBL;Acc:A0A178URC3] 0.03 Orthogroups_2024-Update
Bradi2g56145 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Bradi5g24110 No alias related to AP2 10 0.03 Orthogroups_2024-Update
Brara.B02302.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
Brara.D01390.1 No alias subgroup ERF-II-DEAR transcription factor 0.03 Orthogroups_2024-Update
Brara.E00465.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.G02224.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.04 Orthogroups_2024-Update
Brara.J02251.1 No alias cutin and suberin biosynthesis transcription factor... 0.04 Orthogroups_2024-Update
Glyma.03G017300 No alias related to AP2 11 0.03 Orthogroups_2024-Update
Glyma.03G111700 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
Glyma.03G112100 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
Glyma.05G049900 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G040000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G164800 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G115300 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G172800 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G067110.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
HORVU1Hr1G082310.1 No alias subgroup ERF-X transcription factor 0.03 Orthogroups_2024-Update
HORVU1Hr1G090250.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
HORVU4Hr1G077310.1 No alias subgroup ERF-VII transcription factor 0.02 Orthogroups_2024-Update
HORVU7Hr1G099670.1 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os03g05590 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_1037g0020 No alias (at1g74930 : 134.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_502153g0010 No alias (at5g44210 : 94.4) encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
PSME_00004941-RA No alias (at4g17500 : 94.7) Encodes a member of the ERF (ethylene... 0.02 Orthogroups_2024-Update
PSME_00007051-RA No alias (at1g74930 : 102.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00048384-RA No alias (at5g11190 : 113.0) encodes a member of the ERF... 0.02 Orthogroups_2024-Update
PSME_00051455-RA No alias (at5g21960 : 102.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
PSME_00051697-RA No alias (q40476|erf1_tobac : 102.0) Ethylene-responsive... 0.03 Orthogroups_2024-Update
PSME_00056166-RA No alias (at5g11590 : 103.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00056344-RA No alias (at2g36450 : 117.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
Potri.009G101900 No alias redox responsive transcription factor 1 0.03 Orthogroups_2024-Update
Potri.010G046600 No alias DORNROSCHEN-like 0.02 Orthogroups_2024-Update
Potri.010G186400 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Pp1s138_190V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s72_230V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.1G270800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.1G341100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.2G230500.1 No alias subgroup ERF-X transcription factor 0.02 Orthogroups_2024-Update
Seita.2G276200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.3G031600.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Seita.4G180800.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Seita.8G237900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G455400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G481400.1 No alias transcription factor component *(HRE/RAP2.12) of... 0.03 Orthogroups_2024-Update
Sobic.001G502300.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G084600.1 No alias cutin and suberin biosynthesis transcription factor... 0.02 Orthogroups_2024-Update
Sobic.009G151600.2 No alias subgroup ERF-X transcription factor 0.03 Orthogroups_2024-Update
Solyc03g123500 No alias GCC box binding protein C.4 0.03 Orthogroups_2024-Update
Solyc05g013540 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen08g026910 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000725 recombinational repair IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009617 response to bacterium IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
CC GO:0030289 protein phosphatase 4 complex IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
BP GO:0042742 defense response to bacterium IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 82 131
No external refs found!