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  5. Brara.I01453.1

Brara.I01453.1


Description : LRR-domain extensin


Gene families : OG_42_0000323 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000323_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I01453.1
Cluster HCAA Clusters: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
HORVU6Hr1G019290.2 No alias LRR-domain extensin 0.05 Orthogroups_2024-Update
Potri.010G083100 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
Potri.014G036700 No alias Leucine-rich repeat (LRR) family protein 0.04 Orthogroups_2024-Update
Seita.9G057000.1 No alias LRR-domain extensin 0.03 Orthogroups_2024-Update
Sobic.004G035800.1 No alias LRR-domain extensin 0.03 Orthogroups_2024-Update
Sopen07g027810 No alias Leucine rich repeat 0.02 Orthogroups_2024-Update
Sopen11g001150 No alias Leucine Rich Repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 57 89
IPR001611 Leu-rich_rpt 125 182
No external refs found!