Description : mTERF-type transcription factor
Gene families : OG_42_0000078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000078_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.I01480.1 | |
Cluster | HCAA Clusters: Cluster_361 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_19920 | No alias | transcription termination factor mterf5, chloroplastic | 0.02 | Orthogroups_2024-Update | |
Glyma.08G305300 | No alias | Mitochondrial transcription termination factor family protein | 0.03 | Orthogroups_2024-Update | |
Glyma.18G107500 | No alias | Mitochondrial transcription termination factor family protein | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G013280.1 | No alias | mTERF-type transcription factor | 0.04 | Orthogroups_2024-Update | |
HORVU6Hr1G003550.1 | No alias | mTERF-type transcription factor | 0.03 | Orthogroups_2024-Update | |
LOC_Os06g12040 | No alias | mTERF family protein, expressed | 0.03 | Orthogroups_2024-Update | |
PSME_00023020-RA | No alias | (at1g79220 : 108.0) Mitochondrial transcription... | 0.03 | Orthogroups_2024-Update | |
PSME_00048595-RA | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
PSME_00053051-RA | No alias | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
PSME_00056194-RA | No alias | (at5g64950 : 106.0) Mitochondrial transcription... | 0.02 | Orthogroups_2024-Update | |
Sobic.010G041100.1 | No alias | mTERF-type transcription factor | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003690 | double-stranded DNA binding | IEA | 16Dec |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Predicted GO |
MF | GO:0003824 | catalytic activity | IEP | Predicted GO |
MF | GO:0004489 | methylenetetrahydrofolate reductase (NAD(P)H) activity | IEP | Predicted GO |
MF | GO:0004559 | alpha-mannosidase activity | IEP | Predicted GO |
MF | GO:0005516 | calmodulin binding | IEP | Predicted GO |
CC | GO:0005739 | mitochondrion | IEP | Predicted GO |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
BP | GO:0005996 | monosaccharide metabolic process | IEP | Predicted GO |
BP | GO:0006013 | mannose metabolic process | IEP | Predicted GO |
BP | GO:0006555 | methionine metabolic process | IEP | Predicted GO |
BP | GO:0007010 | cytoskeleton organization | IEP | Predicted GO |
MF | GO:0008017 | microtubule binding | IEP | Predicted GO |
MF | GO:0008092 | cytoskeletal protein binding | IEP | Predicted GO |
MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Predicted GO |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Predicted GO |
MF | GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity | IEP | Predicted GO |
MF | GO:0015020 | glucuronosyltransferase activity | IEP | Predicted GO |
MF | GO:0015631 | tubulin binding | IEP | Predicted GO |
MF | GO:0015923 | mannosidase activity | IEP | Predicted GO |
MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Predicted GO |
MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Predicted GO |
MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Predicted GO |
MF | GO:0016758 | transferase activity, transferring hexosyl groups | IEP | Predicted GO |
MF | GO:0016759 | cellulose synthase activity | IEP | Predicted GO |
MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | Predicted GO |
MF | GO:0016866 | intramolecular transferase activity | IEP | Predicted GO |
MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Predicted GO |
BP | GO:0019318 | hexose metabolic process | IEP | Predicted GO |
BP | GO:0022900 | electron transport chain | IEP | Predicted GO |
BP | GO:0030243 | cellulose metabolic process | IEP | Predicted GO |
BP | GO:0030244 | cellulose biosynthetic process | IEP | Predicted GO |
BP | GO:0055114 | oxidation-reduction process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003690 | MTERF | 85 | 425 |
No external refs found! |