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  5. Brara.I01513.1

Brara.I01513.1


Description : Unknown function


Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I01513.1
Cluster HCAA Clusters: Cluster_387

Target Alias Description ECC score Gene Family Method Actions
At1g12280 No alias Disease resistance protein SUMM2... 0.03 Orthogroups_2024-Update
At4g26090 No alias Disease resistance protein RPS2... 0.03 Orthogroups_2024-Update
Brara.I03326.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G032602 No alias NB-ARC domain-containing disease resistance protein 0.04 Orthogroups_2024-Update
Glyma.12G236500 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G108500.3 No alias Unknown function 0.04 Orthogroups_2024-Update
MA_549555g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00026738-RA No alias (at1g61180 : 216.0) LRR and NB-ARC domains-containing... 0.05 Orthogroups_2024-Update
Potri.011G124000 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
MF GO:0043531 ADP binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009092 homoserine metabolic process IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0019346 transsulfuration IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0050667 homocysteine metabolic process IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 251 369
IPR002182 NB-ARC 153 243
IPR001611 Leu-rich_rpt 505 563
No external refs found!