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  5. Brara.I01528.1

Brara.I01528.1


Description : helicase component *(RecQ4A) of RTR Holliday junction dissolution complex


Gene families : OG_42_0000769 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000769_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I01528.1
Cluster HCAA Clusters: Cluster_243


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0005524 ATP binding IEA 16Dec
BP GO:0006260 DNA replication IEA 16Dec
BP GO:0006281 DNA repair IEA 16Dec
MF GO:0043138 3'-5' DNA helicase activity IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Predicted GO
CC GO:0036452 ESCRT complex IEP Predicted GO
CC GO:0044440 endosomal part IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
BP GO:0071985 multivesicular body sorting pathway IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
CC GO:1902554 serine/threonine protein kinase complex IEP Predicted GO
CC GO:1902911 protein kinase complex IEP Predicted GO
CC GO:1990316 Atg1/ULK1 kinase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002121 HRDC_dom 949 1016
IPR001650 Helicase_C 592 698
IPR018982 RQC_domain 797 911
IPR032284 RecQ_Zn-bd 710 789
IPR011545 DEAD/DEAH_box_helicase_dom 387 555
No external refs found!