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  5. Brara.I01541.1

Brara.I01541.1


Description : class I ARF-GAP ARF-GTPase-activating protein


Gene families : OG_42_0001461 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001461_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I01541.1
Cluster HCAA Clusters: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
A4A49_10144 No alias adp-ribosylation factor gtpase-activating protein agd3 0.04 Orthogroups_2024-Update
Brara.B03783.1 No alias class I ARF-GAP ARF-GTPase-activating protein 0.03 Orthogroups_2024-Update
Sobic.007G189100.1 No alias class I ARF-GAP ARF-GTPase-activating protein 0.07 Orthogroups_2024-Update
Sopen05g018360 No alias Putative GTPase activating protein for Arf 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEA 16Dec
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 665 736
IPR001849 PH_domain 287 416
IPR001164 ArfGAP_dom 460 587
No external refs found!