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  5. At2g30210

At2g30210


Description : Laccase-3 [Source:UniProtKB/Swiss-Prot;Acc:Q56YT0]


Gene families : OG_42_0000051 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g30210
Cluster HCCA clusters: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
78002 No alias Laccase/Diphenol oxidase family protein 0.03 Orthogroups_2024-Update
A4A49_05486 No alias laccase-17 0.03 Orthogroups_2024-Update
A4A49_13107 No alias laccase-14 0.02 Orthogroups_2024-Update
A4A49_13303 No alias laccase-7 0.04 Orthogroups_2024-Update
A4A49_15209 No alias laccase-4 0.04 Orthogroups_2024-Update
A4A49_20277 No alias laccase-11 0.04 Orthogroups_2024-Update
A4A49_21564 No alias laccase-15 0.02 Orthogroups_2024-Update
At2g29130 No alias Laccase-2 [Source:UniProtKB/Swiss-Prot;Acc:O81081] 0.03 Orthogroups_2024-Update
At3g09220 No alias Laccase-7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR40] 0.03 Orthogroups_2024-Update
At5g05390 No alias Laccase-12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLB5] 0.03 Orthogroups_2024-Update
Bradi2g23350 No alias laccase 17 0.02 Orthogroups_2024-Update
Bradi2g54680 No alias laccase 17 0.04 Orthogroups_2024-Update
Brara.B01051.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.04 Orthogroups_2024-Update
Brara.D02450.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
Brara.E02945.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
Brara.H02436.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
Brara.J02661.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.04 Orthogroups_2024-Update
GRMZM2G336337 No alias laccase 12 0.03 Orthogroups_2024-Update
Glyma.03G077900 No alias Laccase/Diphenol oxidase family protein 0.04 Orthogroups_2024-Update
Glyma.18G065100 No alias Laccase/Diphenol oxidase family protein 0.04 Orthogroups_2024-Update
LOC_Os01g44330 No alias laccase precursor protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_75861g0010 No alias (at1g18140 : 648.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00003270-RA No alias (at5g60020 : 723.0) putative laccase, a member of... 0.04 Orthogroups_2024-Update
PSME_00005164-RA No alias (at5g05390 : 649.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00007029-RA No alias (at5g05390 : 758.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00013183-RA No alias (at5g60020 : 725.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
PSME_00015371-RA No alias (at5g05390 : 674.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
PSME_00018932-RA No alias (at5g05390 : 800.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
PSME_00024478-RA No alias (at5g05390 : 702.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00028271-RA No alias (at5g05390 : 745.0) putative laccase, a member of... 0.04 Orthogroups_2024-Update
PSME_00028638-RA No alias (at5g05390 : 656.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
PSME_00035589-RA No alias (at5g05390 : 699.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
PSME_00043660-RA No alias (at5g03260 : 768.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
PSME_00043959-RA No alias (at5g03260 : 782.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00044158-RA No alias (at2g40370 : 673.0) putative laccase, a member of... 0.04 Orthogroups_2024-Update
PSME_00044448-RA No alias (at5g05390 : 808.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
Potri.001G054600 No alias laccase 17 0.03 Orthogroups_2024-Update
Potri.005G200700 No alias laccase 14 0.03 Orthogroups_2024-Update
Potri.006G087100 No alias laccase 17 0.03 Orthogroups_2024-Update
Potri.008G064000 No alias Laccase/Diphenol oxidase family protein 0.03 Orthogroups_2024-Update
Potri.010G183500 No alias laccase 12 0.03 Orthogroups_2024-Update
Potri.010G183600 No alias laccase 5 0.04 Orthogroups_2024-Update
Potri.010G193100 No alias Laccase/Diphenol oxidase family protein 0.03 Orthogroups_2024-Update
Potri.015G040700 No alias laccase 1 0.03 Orthogroups_2024-Update
Potri.016G106000 No alias laccase 7 0.03 Orthogroups_2024-Update
Potri.016G112000 No alias Laccase/Diphenol oxidase family protein 0.03 Orthogroups_2024-Update
Potri.019G124300 No alias laccase 3 0.03 Orthogroups_2024-Update
Pp1s175_122V6 No alias laccase 90a 0.03 Orthogroups_2024-Update
Pp1s86_61V6 No alias laccase (diphenol oxidase)-like protein 0.02 Orthogroups_2024-Update
Sobic.004G236100.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.02 Orthogroups_2024-Update
Solyc02g085110 No alias Laccase (AHRD V3.3 *** I1J8U1_SOYBN) 0.03 Orthogroups_2024-Update
Solyc09g010990 No alias Laccase (AHRD V3.3 *** M1AHK0_SOLTU) 0.04 Orthogroups_2024-Update
Solyc09g011970 No alias Laccase (AHRD V3.3 *** B9HBT3_POPTR) 0.04 Orthogroups_2024-Update
Solyc09g014240 No alias Laccase (AHRD V3.3 *** P93366_TOBAC) 0.03 Orthogroups_2024-Update
Sopen02g029800 No alias Multicopper oxidase 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
CC GO:0000808 origin recognition complex IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001117 Cu-oxidase 160 309
IPR011707 Cu-oxidase_3 35 147
IPR011706 Cu-oxidase_2 420 552
No external refs found!