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  5. Brara.I01620.1

Brara.I01620.1


Description : pectin acetylesterase *(PAE)


Gene families : OG_42_0000252 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I01620.1
Cluster HCAA Clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
A4A49_13020 No alias pectin acetylesterase 9 0.03 Orthogroups_2024-Update
A4A49_36028 No alias pectin acetylesterase 8 0.03 Orthogroups_2024-Update
At1g09550 No alias Pectin acetylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:F4I107] 0.05 Orthogroups_2024-Update
At2g46930 No alias Pectin acetylesterase 3 [Source:UniProtKB/Swiss-Prot;Acc:O80731] 0.03 Orthogroups_2024-Update
Brara.G00285.1 No alias pectin acetylesterase *(PAE) 0.03 Orthogroups_2024-Update
Glyma.16G107600 No alias Pectinacetylesterase family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G101640.8 No alias pectin acetylesterase *(PAE) 0.02 Orthogroups_2024-Update
HORVU3Hr1G116480.1 No alias pectin acetylesterase *(PAE) 0.02 Orthogroups_2024-Update
MA_3303g0010 No alias (at5g23870 : 345.0) Pectinacetylesterase family protein;... 0.03 Orthogroups_2024-Update
MA_52077g0010 No alias (at4g19420 : 502.0) Pectinacetylesterase family protein;... 0.04 Orthogroups_2024-Update
PSME_00027560-RA No alias (at4g19420 : 299.0) Pectinacetylesterase family protein;... 0.02 Orthogroups_2024-Update
Seita.5G080600.1 No alias pectin acetylesterase *(PAE) 0.02 Orthogroups_2024-Update
Seita.7G225900.1 No alias pectin acetylesterase *(PAE) 0.04 Orthogroups_2024-Update
Sopen08g001800 No alias Pectinacetylesterase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 54 398
No external refs found!