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  5. Brara.I01686.1

Brara.I01686.1


Description : EC_4.2 carbon-oxygen lyase & mono-/sesquiterpene-/diterpene synthase


Gene families : OG_42_0000137 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I01686.1
Cluster HCAA Clusters: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
A4A49_20624 No alias viridiflorene synthase 0.03 Orthogroups_2024-Update
Brara.A01099.1 No alias EC_4.2 carbon-oxygen lyase &... 0.04 Orthogroups_2024-Update
Brara.C04261.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Glyma.12G138800 No alias terpene synthase 21 0.02 Orthogroups_2024-Update
Potri.007G074400 No alias terpene synthase 21 0.03 Orthogroups_2024-Update
Potri.015G032100 No alias terpene synthase 21 0.03 Orthogroups_2024-Update
Potri.T000400 No alias terpene synthase 21 0.03 Orthogroups_2024-Update
Seita.7G145900.1 No alias EC_4.2 carbon-oxygen lyase &... 0.05 Orthogroups_2024-Update
Seita.7G146000.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Seita.8G155600.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Sobic.007G133900.1 No alias EC_4.2 carbon-oxygen lyase &... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA 16Dec
MF GO:0010333 terpene synthase activity IEA 16Dec
MF GO:0016829 lyase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005102 signaling receptor binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008200 ion channel inhibitor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
MF GO:0016247 channel regulator activity IEP Predicted GO
MF GO:0016248 channel inhibitor activity IEP Predicted GO
MF GO:0017080 sodium channel regulator activity IEP Predicted GO
MF GO:0019871 sodium channel inhibitor activity IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
CC GO:0030915 Smc5-Smc6 complex IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0099106 ion channel regulator activity IEP Predicted GO
CC GO:0106068 SUMO ligase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 280 546
IPR001906 Terpene_synth_N 72 249
No external refs found!