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  5. Brara.I01710.1

Brara.I01710.1


Description : component *(ATG18) of autophagosome ATG9-2-18 membrane shuttling complex


Gene families : OG_42_0001797 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001797_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I01710.1
Cluster HCAA Clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
A4A49_19682 No alias autophagy-related protein 18f 0.05 Orthogroups_2024-Update
MA_17400g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 359 386
IPR001680 WD40_repeat 424 451
IPR022175 BCAS3 628 702
IPR022175 BCAS3 498 615
No external refs found!