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  5. Brara.I01827.1

Brara.I01827.1


Description : Fasciclin-type arabinogalactan protein


Gene families : OG_42_0000509 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I01827.1
Cluster HCAA Clusters: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
At1g03870 No alias At1g03870 [Source:UniProtKB/TrEMBL;Acc:B3LF88] 0.05 Orthogroups_2024-Update
Bradi2g34650 No alias FASCICLIN-like arabinogalactan-protein 11 0.02 Orthogroups_2024-Update
LOC_Os01g06580 No alias fasciclin domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g20540 No alias fasciclin domain containing protein, expressed 0.03 Orthogroups_2024-Update
Potri.006G129200 No alias FASCICLIN-like arabinogalactan-protein 11 0.03 Orthogroups_2024-Update
Potri.012G127900 No alias FASCICLIN-like arabinogalactan-protein 11 0.03 Orthogroups_2024-Update
Potri.013G120600 No alias FASCICLIN-like arabinogalactan 6 0.03 Orthogroups_2024-Update
Seita.3G146700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.3G146800.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Seita.5G263600.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Solyc07g053530 No alias Fasciclin-like arabinogalactan protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Predicted GO
MF GO:0003852 2-isopropylmalate synthase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
BP GO:0006551 leucine metabolic process IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006751 glutathione catabolic process IEP Predicted GO
BP GO:0009081 branched-chain amino acid metabolic process IEP Predicted GO
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predicted GO
BP GO:0009098 leucine biosynthetic process IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042219 cellular modified amino acid catabolic process IEP Predicted GO
BP GO:0043171 peptide catabolic process IEP Predicted GO
BP GO:0044273 sulfur compound catabolic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000782 FAS1_domain 49 184
No external refs found!