1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.I01846.1

Brara.I01846.1


Description : EC_1.1 oxidoreductase acting on CH-OH group of donor


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I01846.1
Cluster HCAA Clusters: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
At1g30720 No alias Berberine bridge enzyme-like 10... 0.03 Orthogroups_2024-Update
Glyma.05G125900 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.08G059000 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Glyma.08G080500 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.15G133200 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.15G134300 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
LOC_Os08g06180 No alias reticuline oxidase precursor, putative 0.02 Orthogroups_2024-Update
LOC_Os11g30310 No alias reticuline oxidase-like protein precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_613919g0010 No alias (at5g44390 : 411.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
Potri.001G459100 No alias FAD-binding Berberine family protein 0.05 Orthogroups_2024-Update
Potri.001G462800 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.001G464800 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Potri.011G162732 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Seita.4G178100.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA 16Dec
MF GO:0050660 flavin adenine dinucleotide binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0016125 sterol metabolic process IEP Predicted GO
BP GO:0016126 sterol biosynthetic process IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0030906 retromer, cargo-selective complex IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 80 214
IPR012951 BBE 465 525
No external refs found!