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  5. Brara.I01865.1

Brara.I01865.1


Description : nucleoside diphosphate kinase & EC_2.7 transferase transferring phosphorus-containing group


Gene families : OG_42_0000899 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000899_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I01865.1
Cluster HCAA Clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Bradi3g33570 No alias Nucleoside diphosphate kinase family protein 0.07 Orthogroups_2024-Update
Brara.F02224.1 No alias nucleoside diphosphate kinase & EC_2.7 transferase... 0.03 Orthogroups_2024-Update
Glyma.03G109500 No alias Nucleoside diphosphate kinase family protein 0.06 Orthogroups_2024-Update
Glyma.07G115900 No alias Nucleoside diphosphate kinase family protein 0.08 Orthogroups_2024-Update
HORVU1Hr1G055440.1 No alias nucleoside diphosphate kinase & EC_2.7 transferase... 0.1 Orthogroups_2024-Update
PSME_00015562-RA No alias (q8rxa8|ndk4_spiol : 326.0) Nucleoside diphosphate... 0.03 Orthogroups_2024-Update
PSME_00017098-RA No alias (q02254|ndk1_spiol : 270.0) Nucleoside diphosphate... 0.09 Orthogroups_2024-Update
PSME_00036809-RA No alias (q852s5|ndk2_tobac : 240.0) Nucleoside diphosphate... 0.03 Orthogroups_2024-Update
Potri.002G138800 No alias Nucleoside diphosphate kinase family protein 0.03 Orthogroups_2024-Update
Potri.014G049900 No alias Nucleoside diphosphate kinase family protein 0.12 Orthogroups_2024-Update
Pp1s165_13V6 No alias NDPK1 nucleotide diphosphate kinase 1 protein 0.03 Orthogroups_2024-Update
Seita.9G319200.1 No alias nucleoside diphosphate kinase & EC_2.7 transferase... 0.07 Orthogroups_2024-Update
Sobic.001G295200.1 No alias nucleoside diphosphate kinase & EC_2.7 transferase... 0.1 Orthogroups_2024-Update
Solyc01g089970 No alias Nucleoside diphosphate kinase (AHRD V3.3 *** NDK_CAPAN) 0.05 Orthogroups_2024-Update
Sopen01g035830 No alias Nucleoside diphosphate kinase 0.22 Orthogroups_2024-Update
Sopen08g030680 No alias Nucleoside diphosphate kinase 0.05 Orthogroups_2024-Update
evm.model.tig00020909.43 No alias (q02254|ndk1_spiol : 194.0) Nucleoside diphosphate... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006188 IMP biosynthetic process IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046040 IMP metabolic process IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR034907 NDK-like_dom 2 133
No external refs found!