Description : component *(eL32) of large ribosomal-subunit (LSU) proteome
Gene families : OG_42_0001481 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001481_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.I01935.1 | |
Cluster | HCAA Clusters: Cluster_122 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
146656 | No alias | Ribosomal protein L32e | 0.04 | Orthogroups_2024-Update | |
A4A49_20600 | No alias | 60s ribosomal protein l32-1 | 0.04 | Orthogroups_2024-Update | |
A4A49_36410 | No alias | 60s ribosomal protein l32-1 | 0.05 | Orthogroups_2024-Update | |
A4A49_65839 | No alias | 60s ribosomal protein l32-1 | 0.05 | Orthogroups_2024-Update | |
Cre06.g289550 | No alias | Ribosomal protein L32e | 0.02 | Orthogroups_2024-Update | |
HORVU7Hr1G052960.1 | No alias | component *(eL32) of large ribosomal-subunit (LSU) proteome | 0.02 | Orthogroups_2024-Update | |
Kfl00109_0130 | kfl00109_0130_v1.1 | (at4g18100 : 201.0) Ribosomal protein L32e; FUNCTIONS... | 0.02 | Orthogroups_2024-Update | |
Mp7g12480.1 | No alias | component RPL32 of LSU proteome component | 0.03 | Orthogroups_2024-Update | |
Potri.001G353900 | No alias | Ribosomal protein L32e | 0.03 | Orthogroups_2024-Update | |
Potri.014G191000 | No alias | Ribosomal protein L32e | 0.02 | Orthogroups_2024-Update | |
Pp1s249_85V6 | No alias | 60s ribosomal protein l32 | 0.04 | Orthogroups_2024-Update | |
Pp1s505_19V6 | No alias | 60s ribosomal protein l32 | 0.03 | Orthogroups_2024-Update | |
Pp1s84_96V6 | No alias | 60s ribosomal protein l32 | 0.04 | Orthogroups_2024-Update | |
Pp1s98_19V6 | No alias | 60s ribosomal protein l32 | 0.05 | Orthogroups_2024-Update | |
Sobic.002G255300.1 | No alias | component *(eL32) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
evm.model.contig_3468.4 | No alias | (at4g18100 : 165.0) Ribosomal protein L32e; FUNCTIONS... | 0.02 | Orthogroups_2024-Update | |
evm.model.tig00020554.140 | No alias | (at4g18100 : 184.0) Ribosomal protein L32e; FUNCTIONS... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | 16Dec |
CC | GO:0005840 | ribosome | IEA | 16Dec |
BP | GO:0006412 | translation | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000154 | rRNA modification | IEP | Predicted GO |
BP | GO:0000966 | RNA 5'-end processing | IEP | Predicted GO |
BP | GO:0001510 | RNA methylation | IEP | Predicted GO |
BP | GO:0001682 | tRNA 5'-leader removal | IEP | Predicted GO |
MF | GO:0003684 | damaged DNA binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006289 | nucleotide-excision repair | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
BP | GO:0008033 | tRNA processing | IEP | Predicted GO |
MF | GO:0008168 | methyltransferase activity | IEP | Predicted GO |
MF | GO:0008170 | N-methyltransferase activity | IEP | Predicted GO |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
MF | GO:0008175 | tRNA methyltransferase activity | IEP | Predicted GO |
MF | GO:0008649 | rRNA methyltransferase activity | IEP | Predicted GO |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Predicted GO |
BP | GO:0009451 | RNA modification | IEP | Predicted GO |
BP | GO:0010498 | proteasomal protein catabolic process | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Predicted GO |
MF | GO:0016435 | rRNA (guanine) methyltransferase activity | IEP | Predicted GO |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
BP | GO:0030163 | protein catabolic process | IEP | Predicted GO |
CC | GO:0030677 | ribonuclease P complex | IEP | Predicted GO |
BP | GO:0031167 | rRNA methylation | IEP | Predicted GO |
BP | GO:0032259 | methylation | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
BP | GO:0034471 | ncRNA 5'-end processing | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
BP | GO:0036265 | RNA (guanine-N7)-methylation | IEP | Predicted GO |
BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | Predicted GO |
BP | GO:0043414 | macromolecule methylation | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
BP | GO:0070475 | rRNA base methylation | IEP | Predicted GO |
BP | GO:0070476 | rRNA (guanine-N7)-methylation | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
BP | GO:0099116 | tRNA 5'-end processing | IEP | Predicted GO |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predicted GO |
MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Predicted GO |
CC | GO:1902555 | endoribonuclease complex | IEP | Predicted GO |
CC | GO:1905348 | endonuclease complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001515 | Ribosomal_L32e | 16 | 122 |
No external refs found! |