Brara.I01937.1

Description : effector receptor *(NLR)

Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.I01937.1
Cluster	HCAA Clusters: Cluster_172

Target	Alias	Description	ECC score	Gene Family Method
A4A49_16559	No alias	tmv resistance protein n	0.02	Orthogroups_2024-Update
At2g17050	No alias	disease resistance protein (TIR-NBS-LRR class), putative...	0.03	Orthogroups_2024-Update
Brara.C00455.1	No alias	effector receptor *(NLR)	0.03	Orthogroups_2024-Update
Brara.C00509.1	No alias	effector receptor *(NLR)	0.03	Orthogroups_2024-Update
Brara.I03175.1	No alias	effector receptor *(NLR)	0.03	Orthogroups_2024-Update
Glyma.03G047900	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.02	Orthogroups_2024-Update
Glyma.03G088000	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Orthogroups_2024-Update
Glyma.06G263500	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.03	Orthogroups_2024-Update
Glyma.07G067900	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.03	Orthogroups_2024-Update
Glyma.09G202832	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.03	Orthogroups_2024-Update
Glyma.12G132400	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.03	Orthogroups_2024-Update
Glyma.16G135500	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.03	Orthogroups_2024-Update
Glyma.16G159100	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	Orthogroups_2024-Update
Glyma.16G212300	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.03	Orthogroups_2024-Update
Glyma.16G214557	No alias	disease resistance protein (TIR-NBS-LRR class) family	0.03	Orthogroups_2024-Update
PSME_00004853-RA	No alias	(at5g36930 : 114.0) Disease resistance protein...	0.02	Orthogroups_2024-Update
Potri.003G084200	No alias	transmembrane receptors;ATP binding	0.03	Orthogroups_2024-Update
Potri.006G269900	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.02	Orthogroups_2024-Update
Potri.007G099700	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Orthogroups_2024-Update
Potri.011G013701	No alias	transmembrane receptors;ATP binding	0.03	Orthogroups_2024-Update
Potri.013G098550	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.05	Orthogroups_2024-Update
Solyc08g005510	No alias	disease resistance protein (TIR-NBS-LRR class) (AHRD...	0.03	Orthogroups_2024-Update
Sopen02g010920	No alias	NB-ARC domain	0.02	Orthogroups_2024-Update
Sopen11g005840	No alias	NB-ARC domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0007165	signal transduction	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000491	small nucleolar ribonucleoprotein complex assembly	IEP	Predicted GO
BP	GO:0000492	box C/D snoRNP assembly	IEP	Predicted GO
MF	GO:0010333	terpene synthase activity	IEP	Predicted GO
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Predicted GO
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Predicted GO
MF	GO:0016759	cellulose synthase activity	IEP	Predicted GO
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	Predicted GO
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Predicted GO
BP	GO:0022618	ribonucleoprotein complex assembly	IEP	Predicted GO
BP	GO:0030243	cellulose metabolic process	IEP	Predicted GO
BP	GO:0030244	cellulose biosynthetic process	IEP	Predicted GO
MF	GO:0033743	peptide-methionine (R)-S-oxide reductase activity	IEP	Predicted GO
BP	GO:0071826	ribonucleoprotein complex subunit organization	IEP	Predicted GO
MF	GO:0071949	FAD binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	193	400
IPR011713	Leu-rich_rpt_3	609	627
IPR000157	TIR_dom	9	184

External Links

No external refs found!

Brara.I01937.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation