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  5. Brara.I01953.1

Brara.I01953.1


Description : bHLH-type transcription factor


Gene families : OG_42_0001653 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001653_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I01953.1
Cluster HCAA Clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
422483 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 Orthogroups_2024-Update
A4A49_16429 No alias transcription factor myc2 0.03 Orthogroups_2024-Update
A4A49_29459 No alias transcription factor myc3 0.03 Orthogroups_2024-Update
At4g17880 No alias Transcription factor MYC4... 0.04 Orthogroups_2024-Update
Bradi3g34200 No alias Basic helix-loop-helix (bHLH) DNA-binding family protein 0.02 Orthogroups_2024-Update
Brara.E01770.1 No alias bHLH-type transcription factor 0.04 Orthogroups_2024-Update
Glyma.16G020500 No alias Basic helix-loop-helix (bHLH) DNA-binding family protein 0.03 Orthogroups_2024-Update
Potri.001G083500 No alias Basic helix-loop-helix (bHLH) DNA-binding family protein 0.03 Orthogroups_2024-Update
Potri.002G176900 No alias Basic helix-loop-helix (bHLH) DNA-binding family protein 0.03 Orthogroups_2024-Update
Potri.003G147300 No alias Basic helix-loop-helix (bHLH) DNA-binding family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009086 methionine biosynthetic process IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
MF GO:0044183 protein binding involved in protein folding IEP Predicted GO
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0110102 chloroplast ribulose bisphosphate carboxylase complex assembly IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 39 221
IPR011598 bHLH_dom 341 386
No external refs found!