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  5. Brara.I01960.1

Brara.I01960.1


Description : Unknown function


Gene families : OG_42_0000126 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000126_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I01960.1
Cluster HCAA Clusters: Cluster_400

Target Alias Description ECC score Gene Family Method Actions
A4A49_40682 No alias 14 kda proline-rich protein dc2.15 0.05 Orthogroups_2024-Update
A4A49_64249 No alias lipid transfer protein earli 1 0.02 Orthogroups_2024-Update
At2g45180 No alias At2g45180 [Source:UniProtKB/TrEMBL;Acc:Q42044] 0.03 Orthogroups_2024-Update
At4g12480 No alias PEARLI 1 [Source:UniProtKB/TrEMBL;Acc:A0A178V1J0] 0.04 Orthogroups_2024-Update
At4g22470 No alias Protease inhibitor/seed storage/lipid transfer protein... 0.03 Orthogroups_2024-Update
Brara.I00288.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.I01959.1 No alias Unknown function 0.05 Orthogroups_2024-Update
GRMZM2G351505 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Orthogroups_2024-Update
Glyma.17G140000 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Orthogroups_2024-Update
HORVU0Hr1G031750.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU0Hr1G032410.5 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G109020.9 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G109140.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os04g46810 No alias LTPL120 - Protease inhibitor/seed storage/LTP family... 0.02 Orthogroups_2024-Update
LOC_Os10g40614 No alias LTPL147 - Protease inhibitor/seed storage/LTP family... 0.03 Orthogroups_2024-Update
Seita.7G260500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G327700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen07g022580 No alias Hydrophobic seed protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR027923 Hydrophob_seed_dom 49 129
No external refs found!