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  5. Brara.I02003.1

Brara.I02003.1


Description : transcription factor *(LEC) involved in seed maturation & component *(NF-YB) of NF-Y transcription factor complex


Gene families : OG_42_0000232 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000232_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I02003.1
Cluster HCAA Clusters: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
At2g37060 No alias Nuclear transcription factor Y subunit B-8... 0.05 Orthogroups_2024-Update
Bradi2g15800 No alias nuclear factor Y, subunit B3 0.04 Orthogroups_2024-Update
Pp1s302_35V6 No alias ccaat-binding transcription factor subunit 0.02 Orthogroups_2024-Update
Sopen11g007490 No alias Histone-like transcription factor (CBF/NF-Y) and archaeal histone 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 57 121
No external refs found!