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  5. Brara.I02117.1

Brara.I02117.1


Description : chaperone *(Hsp90)


Gene families : OG_42_0000360 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000360_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I02117.1
Cluster HCAA Clusters: Cluster_383

Target Alias Description ECC score Gene Family Method Actions
Bradi3g39590 No alias HEAT SHOCK PROTEIN 81.4 0.03 Orthogroups_2024-Update
Bradi3g39620 No alias HEAT SHOCK PROTEIN 81.4 0.02 Orthogroups_2024-Update
Bradi3g39630 No alias HEAT SHOCK PROTEIN 81.4 0.03 Orthogroups_2024-Update
Brara.J00788.1 No alias chaperone *(Hsp90) 0.03 Orthogroups_2024-Update
Glyma.14G219700 No alias Chaperone protein htpG family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G072420.2 No alias chaperone *(Hsp90) 0.02 Orthogroups_2024-Update
MA_10434030g0010 No alias (at5g52640 : 1117.0) Encodes a cytosolic heat shock... 0.02 Orthogroups_2024-Update
Potri.006G002800 No alias HEAT SHOCK PROTEIN 81.4 0.03 Orthogroups_2024-Update
evm.model.tig00021126.10 No alias (at5g52640 : 158.0) Encodes a cytosolic heat shock... 0.02 Orthogroups_2024-Update
evm.model.tig00021126.11 No alias (p35016|enpl_catro : 328.0) Endoplasmin homolog... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
BP GO:0006457 protein folding IEA 16Dec
MF GO:0016887 ATPase activity IEA 16Dec
MF GO:0051082 unfolded protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001404 Hsp90_fam 263 764
IPR003594 HATPase_C 99 258
No external refs found!