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  5. Brara.I02133.1

Brara.I02133.1


Description : UBQ ubiquitin-fold protein


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.I02133.1
Cluster HCAA Clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Brara.G00545.1 No alias RUB ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Glyma.13G138600 No alias ubiquitin 4 0.03 Orthogroups_2024-Update
HORVU5Hr1G019590.12 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G019600.6 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Kfl00013_0180 kfl00013_0180_v1.... (at5g03240 : 138.0) encodes ubiquitin that is attached... 0.02 Orthogroups_2024-Update
Kfl00272_g6 kfl00272_g6_v1.1 (at4g05320 : 751.0) One of five polyubiquitin genes in... 0.02 Orthogroups_2024-Update
MA_371071g0010 No alias (at5g03240 : 517.0) encodes ubiquitin that is attached... 0.02 Orthogroups_2024-Update
Mp4g02740.1 No alias ubiquitin-fold protein (UBQ) 0.02 Orthogroups_2024-Update
Potri.017G135600 No alias polyubiquitin 10 0.04 Orthogroups_2024-Update
Seita.5G081000.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Sobic.002G178800.2 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
evm.model.tig00000403.47 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 79 150
IPR000626 Ubiquitin_dom 231 302
IPR000626 Ubiquitin_dom 155 226
IPR000626 Ubiquitin_dom 3 74
No external refs found!