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  5. Brara.I02141.1

Brara.I02141.1


Description : component *(PsbQ) of PS-II oxygen-evolving center


Gene families : OG_42_0005028 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005028_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I02141.1
Cluster HCAA Clusters: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
A4A49_38836 No alias oxygen-evolving enhancer protein 3-2, chloroplastic 0.06 Orthogroups_2024-Update
At4g05180 No alias Oxygen-evolving enhancer protein 3-2, chloroplastic... 0.14 Orthogroups_2024-Update
Cre08.g372450 No alias photosystem II subunit Q-2 0.1 Orthogroups_2024-Update
Glyma.03G114600 No alias photosystem II subunit Q-2 0.11 Orthogroups_2024-Update
Glyma.07G112000 No alias photosystem II subunit Q-2 0.1 Orthogroups_2024-Update
HORVU0Hr1G003270.1 No alias component *(PsbQ) of PS-II oxygen-evolving center 0.05 Orthogroups_2024-Update
Kfl00104_0070 kfl00104_0070_v1.1 (at4g21280 : 133.0) Encodes the PsbQ subunit of the... 0.12 Orthogroups_2024-Update
LOC_Os07g36080 No alias oxygen evolving enhancer protein 3 domain containing... 0.05 Orthogroups_2024-Update
MA_218996g0010 No alias (at4g21280 : 169.0) Encodes the PsbQ subunit of the... 0.07 Orthogroups_2024-Update
Mp4g07510.1 No alias component PsbQ of PS-II oxygen-evolving center 0.06 Orthogroups_2024-Update
PSME_00039005-RA No alias (at4g21280 : 165.0) Encodes the PsbQ subunit of the... 0.06 Orthogroups_2024-Update
Potri.004G031500 No alias photosystem II subunit Q-2 0.03 Orthogroups_2024-Update
Pp1s182_26V6 No alias oxygen-evolving enhancer protein 3-1 0.13 Orthogroups_2024-Update
Pp1s41_281V6 No alias oxygen-evolving enhancer protein 3-1 0.09 Orthogroups_2024-Update
Seita.2G343000.1 No alias component *(PsbQ) of PS-II oxygen-evolving center 0.08 Orthogroups_2024-Update
Sobic.002G329600.1 No alias component *(PsbQ) of PS-II oxygen-evolving center 0.1 Orthogroups_2024-Update
Solyc02g079950 No alias photosystem II oxygen-evolving complex protein 3 0.06 Orthogroups_2024-Update
Sopen02g024700 No alias Oxygen evolving enhancer protein 3 (PsbQ) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
CC GO:0009523 photosystem II IEA 16Dec
CC GO:0009654 photosystem II oxygen evolving complex IEA 16Dec
BP GO:0015979 photosynthesis IEA 16Dec
CC GO:0019898 extrinsic component of membrane IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
InterPro domains Description Start Stop
IPR008797 PSII_PsbQ 29 226
No external refs found!