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  5. Brara.I02212.1

Brara.I02212.1


Description : autophagosome ubiquitin-fold protein *(ATG8)


Gene families : OG_42_0000932 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000932_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I02212.1
Cluster HCAA Clusters: Cluster_330

Target Alias Description ECC score Gene Family Method Actions
A4A49_35038 No alias autophagy-related protein 8f 0.03 Orthogroups_2024-Update
Bradi1g26400 No alias Ubiquitin-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G134613 No alias Ubiquitin-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G003900 No alias Ubiquitin-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G140700 No alias Ubiquitin-like superfamily protein 0.03 Orthogroups_2024-Update
Mp1g21590.1 No alias ATG8 autophagosome ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Potri.002G144600 No alias Ubiquitin-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s249_51V6 No alias autophagy-related protein 8 precursor 0.02 Orthogroups_2024-Update
Seita.6G036300.1 No alias autophagosome ubiquitin-fold protein *(ATG8) 0.04 Orthogroups_2024-Update
Solyc08g078820 No alias Autophagy-related protein (AHRD V3.3 *** K4CNP1_SOLLC) 0.05 Orthogroups_2024-Update
Sopen10g002220 No alias Autophagy protein Atg8 ubiquitin like 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005319 lipid transporter activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004241 Atg8-like 15 117
No external refs found!