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  5. Brara.I02375.1

Brara.I02375.1


Description : clade F phosphatase


Gene families : OG_42_0000194 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000194_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I02375.1
Cluster HCAA Clusters: Cluster_357

Target Alias Description ECC score Gene Family Method Actions
At1g22280 No alias Phytochrome-associated protein phosphatase type 2C... 0.03 Orthogroups_2024-Update
Brara.B03641.1 No alias clade F phosphatase 0.03 Orthogroups_2024-Update
Brara.F02701.1 No alias clade F phosphatase 0.03 Orthogroups_2024-Update
GRMZM2G111232 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
GRMZM2G180471 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
Seita.1G088700.1 No alias clade F phosphatase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
MF GO:0005484 SNAP receptor activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0009262 deoxyribonucleotide metabolic process IEP Predicted GO
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 43 273
No external refs found!