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Description : RING-H2-class ATL-subclass E3 ubiquitin ligase
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.I02379.1 | |
| Cluster | HCAA Clusters: Cluster_335 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 438800 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| A4A49_09451 | No alias | ring-h2 finger protein atl72 | 0.03 | Orthogroups_2024-Update | |
| A4A49_37314 | No alias | e3 ubiquitin-protein ligase atl9 | 0.03 | Orthogroups_2024-Update | |
| At2g42360 | No alias | E3 ubiquitin-protein ligase ATL41... | 0.04 | Orthogroups_2024-Update | |
| At4g09130 | No alias | Putative RING-H2 finger protein ATL37... | 0.03 | Orthogroups_2024-Update | |
| At5g17600 | No alias | RING-H2 finger protein ATL52... | 0.03 | Orthogroups_2024-Update | |
| At5g27420 | No alias | E3 ubiquitin-protein ligase ATL31... | 0.03 | Orthogroups_2024-Update | |
| Brara.A03736.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.C01805.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.05 | Orthogroups_2024-Update | |
| Brara.C03353.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.E02303.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.E02957.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.F02551.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.I00473.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G050774 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.18G239400 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.19G212000 | No alias | AtL5 | 0.03 | Orthogroups_2024-Update | |
| HORVU0Hr1G016510.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| HORVU1Hr1G082030.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| LOC_Os02g08200 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.05 | Orthogroups_2024-Update | |
| LOC_Os04g48310 | No alias | RING-H2 finger protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os05g29710 | No alias | RING-H2 finger protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| MA_114175g0010 | No alias | (at3g16720 : 124.0) RING-H2 protein induced after... | 0.03 | Orthogroups_2024-Update | |
| MA_17362g0010 | No alias | (at5g06490 : 90.5) RING/U-box superfamily protein;... | 0.05 | Orthogroups_2024-Update | |
| PSME_00054098-RA | No alias | (at3g16720 : 124.0) RING-H2 protein induced after... | 0.02 | Orthogroups_2024-Update | |
| PSME_00057213-RA | No alias | (at1g72310 : 115.0) Encodes a putative RING-H2 zinc... | 0.03 | Orthogroups_2024-Update | |
| Potri.008G219200 | No alias | TOXICOS EN LEVADURA 2 | 0.03 | Orthogroups_2024-Update | |
| Pp1s20_280V6 | No alias | ring finger | 0.02 | Orthogroups_2024-Update | |
| Seita.2G087800.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.4G171200.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.7G110600.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Seita.7G205000.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G147301.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G299800.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Sobic.010G157500.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Solyc03g114190 | No alias | RING/U-box superfamily protein, putative (AHRD V3.3 ***... | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003830 | beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity | IEP | Predicted GO |
| BP | GO:0006487 | protein N-linked glycosylation | IEP | Predicted GO |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | Predicted GO |
| BP | GO:0007275 | multicellular organism development | IEP | Predicted GO |
| MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | Predicted GO |
| BP | GO:0032501 | multicellular organismal process | IEP | Predicted GO |
| MF | GO:0043531 | ADP binding | IEP | Predicted GO |
| MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Predicted GO |
| MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 127 | 170 |
| No external refs found! |