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  5. Brara.I02477.1

Brara.I02477.1


Description : metabolite transporter *(DTX)


Gene families : OG_42_0000106 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000106_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I02477.1
Cluster HCAA Clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Bradi1g66270 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Brara.G02419.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Glyma.20G123500 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Kfl00232_0040 kfl00232_0040_v1.1 (at1g73700 : 281.0) MATE efflux family protein;... 0.02 Orthogroups_2024-Update
Pp1s145_130V6 No alias transparent testa 12 0.04 Orthogroups_2024-Update
Sopen10g002990 No alias MatE 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
MF GO:0042910 xenobiotic transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002528 MATE_fam 39 199
IPR002528 MATE_fam 260 421
No external refs found!