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  5. Brara.I02610.1

Brara.I02610.1


Description : organellar-signalling mediator *(RCD1)


Gene families : OG_42_0000647 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000647_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I02610.1
Cluster HCAA Clusters: Cluster_308

Target Alias Description ECC score Gene Family Method Actions
Bradi1g63360 No alias WWE protein-protein interaction domain protein family 0.03 Orthogroups_2024-Update
Bradi2g26225 No alias Function unknown 0.02 Orthogroups_2024-Update
Bradi5g25800 No alias WWE protein-protein interaction domain protein family 0.03 Orthogroups_2024-Update
Kfl00021_0040 kfl00021_0040_v1.1 (at1g23550 : 90.1) Encodes a protein with similarity to... 0.02 Orthogroups_2024-Update
LOC_Os10g42710 No alias RCD1, putative, expressed 0.02 Orthogroups_2024-Update
Potri.002G112300 No alias similar to RCD one 1 0.03 Orthogroups_2024-Update
Potri.015G076500 No alias similar to RCD one 5 0.03 Orthogroups_2024-Update
Pp1s30_104V6 No alias F3C3.1; WWE domain-containing protein / ceo protein,... 0.02 Orthogroups_2024-Update
Seita.1G040500.1 No alias organellar-signalling mediator *(RCD1) 0.03 Orthogroups_2024-Update
Seita.9G481600.1 No alias organellar-signalling mediator *(RCD1) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0003725 double-stranded RNA binding IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010167 response to nitrate IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0015706 nitrate transport IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
BP GO:1901698 response to nitrogen compound IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
CC GO:1902554 serine/threonine protein kinase complex IEP Predicted GO
CC GO:1902911 protein kinase complex IEP Predicted GO
CC GO:1990316 Atg1/ULK1 kinase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR022003 RST 478 544
IPR012317 Poly(ADP-ribose)pol_cat_dom 299 385
No external refs found!