Brara.I02789.1

Description : WRKY-type transcription factor

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.I02789.1
Cluster	HCAA Clusters: Cluster_260

Target	Alias	Description	ECC score	Gene Family Method
At3g01970	No alias	Probable WRKY transcription factor 45...	0.03	Orthogroups_2024-Update
At5g07100	No alias	Probable WRKY transcription factor 26...	0.03	Orthogroups_2024-Update
At5g15130	No alias	Probable WRKY transcription factor 72...	0.05	Orthogroups_2024-Update
At5g49520	No alias	Probable WRKY transcription factor 48...	0.03	Orthogroups_2024-Update
Brara.B01850.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.C01543.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.C01871.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.C02724.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.F01311.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.F03381.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.K00721.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
GRMZM2G012724	No alias	WRKY DNA-binding protein 33	0.03	Orthogroups_2024-Update
GRMZM2G025895	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G111711	No alias	WRKY DNA-binding protein 40	0.03	Orthogroups_2024-Update
GRMZM5G863420	No alias	WRKY DNA-binding protein 51	0.02	Orthogroups_2024-Update
Glyma.01G053800	No alias	WRKY DNA-binding protein 3	0.03	Orthogroups_2024-Update
Glyma.04G218700	No alias	WRKY DNA-binding protein 51	0.03	Orthogroups_2024-Update
Glyma.06G054500	No alias	WRKY DNA-binding protein 50	0.02	Orthogroups_2024-Update
Glyma.16G219800	No alias	WRKY DNA-binding protein 70	0.03	Orthogroups_2024-Update
HORVU1Hr1G090110.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU3Hr1G069320.3	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU4Hr1G022970.2	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
LOC_Os01g53040	No alias	WRKY14, expressed	0.03	Orthogroups_2024-Update
LOC_Os06g44010	No alias	WRKY28, expressed	0.03	Orthogroups_2024-Update
LOC_Os10g18099	No alias	WRKY18, expressed	0.03	Orthogroups_2024-Update
MA_10432362g0010	No alias	(at1g69310 : 113.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
MA_114377g0010	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
MA_179641g0010	No alias	(at1g29860 : 118.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
MA_23415g0010	No alias	(at5g26170 : 117.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
MA_6943842g0010	No alias	(at3g58710 : 149.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
MA_91468g0010	No alias	(at4g01720 : 124.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00011302-RA	No alias	(at4g01720 : 92.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00012259-RA	No alias	(at1g62300 : 138.0) Encodes a transcription factor...	0.02	Orthogroups_2024-Update
PSME_00028885-RA	No alias	(at5g15130 : 194.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00028886-RA	No alias	(at5g15130 : 207.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00036210-RA	No alias	(at1g62300 : 137.0) Encodes a transcription factor...	0.03	Orthogroups_2024-Update
PSME_00042021-RA	No alias	(at4g22070 : 263.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00048777-RA	No alias	(at4g23810 : 118.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00051212-RA	No alias	(at4g11070 : 110.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
Potri.001G044500	No alias	WRKY DNA-binding protein 40	0.03	Orthogroups_2024-Update
Potri.003G138600	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Potri.004G072000	No alias	WRKY DNA-binding protein 27	0.03	Orthogroups_2024-Update
Potri.006G105300	No alias	WRKY DNA-binding protein 33	0.03	Orthogroups_2024-Update
Potri.015G099200	No alias	WRKY DNA-binding protein 75	0.03	Orthogroups_2024-Update
Potri.016G128300	No alias	WRKY DNA-binding protein 33	0.03	Orthogroups_2024-Update
Pp1s115_10V6	No alias	wrky transcription	0.02	Orthogroups_2024-Update
Pp1s159_105V6	No alias	wrky11 - superfamily of tfs having wrky and zinc finger domains	0.03	Orthogroups_2024-Update
Pp1s198_83V6	No alias	wrky11 - superfamily of tfs having wrky and zinc finger domains	0.02	Orthogroups_2024-Update
Pp1s35_401V6	No alias	wrky transcription	0.03	Orthogroups_2024-Update
Pp1s39_217V6	No alias	wrky transcription	0.03	Orthogroups_2024-Update
Pp1s426_30V6	No alias	wrky transcription factor 6	0.05	Orthogroups_2024-Update
Seita.1G062100.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.2G206000.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.5G378000.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.9G084400.1	No alias	WRKY-type transcription factor	0.05	Orthogroups_2024-Update
Sobic.002G174300.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G000600.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.003G276000.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G285500.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.004G065900.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.004G271800.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.005G117400.2	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.007G118301.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.009G068900.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.009G234900.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.010G209200.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Solyc08g082110	No alias	WRKY transcription factor 54	0.04	Orthogroups_2024-Update
Sopen09g005680	No alias	WRKY DNA -binding domain	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000966	RNA 5'-end processing	IEP	Predicted GO
BP	GO:0001682	tRNA 5'-leader removal	IEP	Predicted GO
BP	GO:0008033	tRNA processing	IEP	Predicted GO
CC	GO:0030677	ribonuclease P complex	IEP	Predicted GO
BP	GO:0034471	ncRNA 5'-end processing	IEP	Predicted GO
BP	GO:0099116	tRNA 5'-end processing	IEP	Predicted GO
CC	GO:1902555	endoribonuclease complex	IEP	Predicted GO
CC	GO:1905348	endonuclease complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	204	261

External Links

No external refs found!

Brara.I02789.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation