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  5. Brara.I02816.1

Brara.I02816.1


Description : subfamily ABCC transporter & glutathione S-conjugate transporter


Gene families : OG_42_0000076 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I02816.1
Cluster HCAA Clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
A4A49_10152 No alias abc transporter c family member 14 0.03 Orthogroups_2024-Update
A4A49_11075 No alias abc transporter c family member 3 0.03 Orthogroups_2024-Update
A4A49_16146 No alias abc transporter c family member 5 0.02 Orthogroups_2024-Update
A4A49_42365 No alias abc transporter c family member 14 0.03 Orthogroups_2024-Update
At1g04120 No alias MRP5 [Source:UniProtKB/TrEMBL;Acc:A0A178WGC2] 0.03 Orthogroups_2024-Update
At2g47800 No alias ABC transporter C family member 4... 0.03 Orthogroups_2024-Update
Bradi5g03460 No alias multidrug resistance-associated protein 10 0.02 Orthogroups_2024-Update
Brara.J00233.1 No alias subfamily ABCC transporter 0.03 Orthogroups_2024-Update
Cre13.g564900 No alias multidrug resistance-associated protein 2 0.01 Orthogroups_2024-Update
Cre17.g734612 No alias multidrug resistance-associated protein 2 0.02 Orthogroups_2024-Update
Glyma.03G167800 No alias multidrug resistance-associated protein 5 0.03 Orthogroups_2024-Update
Glyma.08G190700 No alias multidrug resistance-associated protein 6 0.03 Orthogroups_2024-Update
Glyma.15G148500 No alias multidrug resistance-associated protein 4 0.04 Orthogroups_2024-Update
HORVU7Hr1G024960.12 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update
Mp4g11950.1 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update
Mp4g15590.1 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update
Mp5g02230.1 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update
PSME_00029982-RA No alias (at3g60970 : 1078.0) member of MRP subfamily; multidrug... 0.03 Orthogroups_2024-Update
Sobic.001G508200.1 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update
Sobic.006G021900.1 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update
Solyc12g044820 No alias ABC transporter-like family-protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
evm.model.tig00001254.7 No alias (at2g47800 : 162.0) Encodes a plasma membrane localized... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008430 selenium binding IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
MF GO:0036442 proton-exporting ATPase activity IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predicted GO
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 994 1142
IPR003439 ABC_transporter-like 372 507
IPR011527 ABC1_TM_dom 159 310
IPR011527 ABC1_TM_dom 657 915
No external refs found!