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  5. Brara.I02823.1

Brara.I02823.1


Description : ARF-type transcription factor


Gene families : OG_42_0000050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000050_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I02823.1
Cluster HCAA Clusters: Cluster_312

Target Alias Description ECC score Gene Family Method Actions
Bradi3g45880 No alias auxin response factor 1 0.05 Orthogroups_2024-Update
Brara.E01021.1 No alias ARF-type transcription factor 0.03 Orthogroups_2024-Update
Brara.F01355.1 No alias ARF-type transcription factor & auxin signal mediator... 0.03 Orthogroups_2024-Update
GRMZM2G034840 No alias Transcriptional factor B3 family protein /... 0.03 Orthogroups_2024-Update
GRMZM2G081406 No alias auxin response factor 16 0.03 Orthogroups_2024-Update
Glyma.07G130400 No alias Transcriptional factor B3 family protein /... 0.04 Orthogroups_2024-Update
Glyma.08G100100 No alias auxin response factor 8 0.03 Orthogroups_2024-Update
Glyma.10G210600 No alias auxin response factor 16 0.05 Orthogroups_2024-Update
Glyma.13G112600 No alias Transcriptional factor B3 family protein /... 0.04 Orthogroups_2024-Update
Glyma.13G221400 No alias auxin response factor 8 0.03 Orthogroups_2024-Update
Glyma.15G091000 No alias auxin response factor 8 0.05 Orthogroups_2024-Update
LOC_Os02g04810 No alias auxin response factor 5, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g36054 No alias auxin response factor 9, putative, expressed 0.02 Orthogroups_2024-Update
MA_10432349g0010 No alias (at5g62000 : 394.0) Encodes an auxin response factor.... 0.03 Orthogroups_2024-Update
PSME_00023239-RA No alias (at1g30330 : 665.0) Encodes a member of the auxin... 0.03 Orthogroups_2024-Update
Seita.3G020000.1 No alias ARF-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G037800.1 No alias ARF-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.009G196900.1 No alias ARF-type transcription factor 0.03 Orthogroups_2024-Update
Solyc04g081240 No alias No description available 0.03 Orthogroups_2024-Update
Solyc05g047460 No alias Auxin Response Factor 7B 0.03 Orthogroups_2024-Update
Solyc07g016180 No alias Auxin Response Factor 7A 0.03 Orthogroups_2024-Update
Sopen00g003680 No alias Auxin response factor 0.03 Orthogroups_2024-Update
Sopen02g011920 No alias Auxin response factor 0.02 Orthogroups_2024-Update
Sopen04g034850 No alias Auxin response factor 0.02 Orthogroups_2024-Update
Sopen09g002650 No alias Auxin response factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006417 regulation of translation IEP Predicted GO
BP GO:0006448 regulation of translational elongation IEP Predicted GO
BP GO:0006449 regulation of translational termination IEP Predicted GO
BP GO:0009891 positive regulation of biosynthetic process IEP Predicted GO
BP GO:0009893 positive regulation of metabolic process IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010257 NADH dehydrogenase complex assembly IEP Predicted GO
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010608 posttranscriptional regulation of gene expression IEP Predicted GO
BP GO:0010628 positive regulation of gene expression IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
BP GO:0031325 positive regulation of cellular metabolic process IEP Predicted GO
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
BP GO:0032268 regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0032981 mitochondrial respiratory chain complex I assembly IEP Predicted GO
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
BP GO:0034248 regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
BP GO:0043243 positive regulation of protein complex disassembly IEP Predicted GO
BP GO:0043244 regulation of protein complex disassembly IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0045727 positive regulation of translation IEP Predicted GO
BP GO:0045901 positive regulation of translational elongation IEP Predicted GO
BP GO:0045905 positive regulation of translational termination IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0048522 positive regulation of cellular process IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051130 positive regulation of cellular component organization IEP Predicted GO
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
BP GO:0051247 positive regulation of protein metabolic process IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 129 208
No external refs found!