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  5. Brara.I02841.1

Brara.I02841.1


Description : TIFY-type transcription factor


Gene families : OG_42_0003820 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003820_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I02841.1
Cluster HCAA Clusters: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Bradi1g58491 No alias jasmonate-zim-domain protein 8 0.02 Orthogroups_2024-Update
Sobic.002G036150.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0000930 gamma-tubulin complex IEP Predicted GO
CC GO:0000931 gamma-tubulin large complex IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009092 homoserine metabolic process IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0019346 transsulfuration IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
BP GO:0031503 protein-containing complex localization IEP Predicted GO
BP GO:0033566 gamma-tubulin complex localization IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0034629 cellular protein-containing complex localization IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
CC GO:0044450 microtubule organizing center part IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
BP GO:0050667 homocysteine metabolic process IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR010399 Tify_dom 39 70
IPR018467 CCT_CS 105 127
No external refs found!