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  5. Brara.I02933.1

Brara.I02933.1


Description : A-class RAB GTPase


Gene families : OG_42_0000131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I02933.1
Cluster HCAA Clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
At1g01200 No alias RABA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3F7] 0.02 Orthogroups_2024-Update
At4g18430 No alias Ras-related protein RABA1e... 0.04 Orthogroups_2024-Update
At5g45750 No alias RABA1c [Source:UniProtKB/TrEMBL;Acc:A0A178UDB2] 0.03 Orthogroups_2024-Update
Brara.H00953.1 No alias A-class RAB GTPase 0.03 Orthogroups_2024-Update
Glyma.02G176000 No alias RAB GTPase homolog A4D 0.03 Orthogroups_2024-Update
Glyma.14G064800 No alias RAB GTPase homolog A2B 0.04 Orthogroups_2024-Update
HORVU5Hr1G120210.4 No alias A-class RAB GTPase 0.03 Orthogroups_2024-Update
LOC_Os05g48980 No alias ras-related protein, putative, expressed 0.04 Orthogroups_2024-Update
PSME_00015935-RA No alias (at3g12160 : 299.0) Encodes RABA4D, a member of the... 0.03 Orthogroups_2024-Update
Pp1s26_33V6 No alias member ras oncogene family 0.02 Orthogroups_2024-Update
Solyc03g064020 No alias Ras-related protein RABA4d (AHRD V3.3 *** RAA4D_ARATH) 0.03 Orthogroups_2024-Update
Sopen01g033860 No alias Ras family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA 16Dec
MF GO:0005525 GTP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0008200 ion channel inhibitor activity IEP Predicted GO
MF GO:0016247 channel regulator activity IEP Predicted GO
MF GO:0016248 channel inhibitor activity IEP Predicted GO
MF GO:0017080 sodium channel regulator activity IEP Predicted GO
MF GO:0019871 sodium channel inhibitor activity IEP Predicted GO
MF GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
MF GO:0099106 ion channel regulator activity IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001806 Small_GTPase 15 175
No external refs found!