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  5. Brara.I03021.1

Brara.I03021.1


Description : SBP-type transcription factor


Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I03021.1
Cluster HCAA Clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
A4A49_18444 No alias squamosa promoter-binding-like protein 5 0.03 Orthogroups_2024-Update
At2g42200 No alias Squamosa promoter-binding-like protein 9... 0.03 Orthogroups_2024-Update
At5g43270 No alias Squamosa promoter-binding-like protein 2... 0.03 Orthogroups_2024-Update
Bradi1g26720 No alias squamosa promoter binding protein-like 4 0.02 Orthogroups_2024-Update
Brara.A03153.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Cre01.g012200 No alias squamosa promoter-binding protein-like 12 0.01 Orthogroups_2024-Update
Cre07.g335150 No alias squamosa promoter binding protein-like 4 0.01 Orthogroups_2024-Update
GRMZM2G101511 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.02 Orthogroups_2024-Update
Glyma.02G121300 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
Glyma.06G205701 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
HORVU5Hr1G076380.9 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g69830 No alias OsSPL2 - SBP-box gene family member, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g44860 No alias OsSPL10 - SBP-box gene family member, expressed 0.02 Orthogroups_2024-Update
PSME_00051919-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Potri.014G057800 No alias squamosa promoter binding protein-like 10 0.03 Orthogroups_2024-Update
Sobic.010G254200.2 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Solyc07g053810 No alias Squamosa promoter binding protein 4 0.02 Orthogroups_2024-Update
Sopen02g022770 No alias SBP domain 0.02 Orthogroups_2024-Update
Sopen07g027780 No alias SBP domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0043545 molybdopterin cofactor metabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0051189 prosthetic group metabolic process IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
InterPro domains Description Start Stop
IPR004333 SBP_dom 164 237
No external refs found!