1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.I03055.1

Brara.I03055.1


Description : calcium sensor *(CML)


Gene families : OG_42_0000644 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000644_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I03055.1
Cluster HCAA Clusters: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
At2g15680 No alias CML30 [Source:UniProtKB/TrEMBL;Acc:A0A178VPG8] 0.03 Orthogroups_2024-Update
At2g36180 No alias Probable calcium-binding protein CML31... 0.03 Orthogroups_2024-Update
Brara.H02086.1 No alias calcium sensor *(CML) 0.04 Orthogroups_2024-Update
Glyma.02G133000 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
MA_194997g0010 No alias (at1g24620 : 137.0) EF hand calcium-binding protein... 0.03 Orthogroups_2024-Update
MA_52212g0010 No alias (at1g24620 : 127.0) EF hand calcium-binding protein... 0.03 Orthogroups_2024-Update
evm.model.contig_2290.1 No alias (gnl|cdd|68872 : 94.0) no description available &... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005319 lipid transporter activity IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 39 98
IPR002048 EF_hand_dom 111 173
No external refs found!