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  5. Brara.I03103.1

Brara.I03103.1


Description : PEP carboxylase *(PPC)


Gene families : OG_42_0000687 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000687_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I03103.1
Cluster HCAA Clusters: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
Brara.G02500.1 No alias PEP carboxylase *(PPC) 0.03 Orthogroups_2024-Update
Seita.2G173700.1 No alias PEP carboxylase *(PPC) & EC_4.1 carbon-carbon lyase 0.03 Orthogroups_2024-Update
Seita.4G175200.1 No alias PEP carboxylase *(PPC) & EC_4.1 carbon-carbon lyase 0.02 Orthogroups_2024-Update
Sobic.002G167000.1 No alias PEP carboxylase *(PPC) & EC_4.1 carbon-carbon lyase 0.03 Orthogroups_2024-Update
Sopen12g006040 No alias Phosphoenolpyruvate carboxylase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEA 16Dec
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEA 16Dec
BP GO:0015977 carbon fixation IEA 16Dec
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR021135 PEP_COase 18 322
IPR021135 PEP_COase 464 1054
No external refs found!