Brara.I03146.1

Description : transcription factor *(DOF)

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.I03146.1
Cluster	HCAA Clusters: Cluster_31

Target	Alias	Description	ECC score	Gene Family Method
29563	No alias	OBF binding protein 4	0.02	Orthogroups_2024-Update
29617	No alias	Dof-type zinc finger DNA-binding family protein	0.06	Orthogroups_2024-Update
89924	No alias	cycling DOF factor 1	0.03	Orthogroups_2024-Update
A4A49_12086	No alias	cyclic dof factor 2	0.05	Orthogroups_2024-Update
At3g47500	No alias	Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3]	0.03	Orthogroups_2024-Update
At5g62430	No alias	Cyclic dof factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1E3]	0.03	Orthogroups_2024-Update
Bradi2g09720	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
GRMZM2G134545	No alias	TARGET OF MONOPTEROS 6	0.03	Orthogroups_2024-Update
Glyma.05G025900	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
Glyma.11G059300	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Orthogroups_2024-Update
Glyma.13G237500	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.13G241900	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.15G071400	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.19G257500	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Orthogroups_2024-Update
Glyma.20G035200	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
HORVU2Hr1G017290.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Potri.004G121800	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Potri.008G087800	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Potri.017G084600	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Potri.019G040700	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
Pp1s124_139V6	No alias	zinc finger	0.03	Orthogroups_2024-Update
Pp1s18_64V6	No alias	No description available	0.03	Orthogroups_2024-Update
Pp1s351_46V6	No alias	zinc finger	0.02	Orthogroups_2024-Update
Pp1s69_113V6	No alias	zinc finger	0.05	Orthogroups_2024-Update
Seita.9G259300.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Seita.9G525000.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Solyc02g067230	No alias	Dof zinc finger protein3	0.05	Orthogroups_2024-Update
Solyc02g090220	No alias	Zinc finger, Dof-type (AHRD V3.3 *** A0A124SC40_CYNCS)	0.03	Orthogroups_2024-Update
Solyc05g007880	No alias	Dof zinc finger protein (AHRD V3.3 *** W9S8B0_9ROSA)	0.05	Orthogroups_2024-Update
Sopen02g016410	No alias	Dof domain, zinc finger	0.06	Orthogroups_2024-Update
Sopen02g023480	No alias	Dof domain, zinc finger	0.04	Orthogroups_2024-Update
Sopen05g003730	No alias	Dof domain, zinc finger	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	Predicted GO
BP	GO:0005976	polysaccharide metabolic process	IEP	Predicted GO
MF	GO:0008270	zinc ion binding	IEP	Predicted GO
BP	GO:0008285	negative regulation of cell proliferation	IEP	Predicted GO
BP	GO:0009056	catabolic process	IEP	Predicted GO
BP	GO:0009057	macromolecule catabolic process	IEP	Predicted GO
BP	GO:0016052	carbohydrate catabolic process	IEP	Predicted GO
MF	GO:0016160	amylase activity	IEP	Predicted GO
MF	GO:0016161	beta-amylase activity	IEP	Predicted GO
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Predicted GO
BP	GO:0042127	regulation of cell proliferation	IEP	Predicted GO
BP	GO:1901575	organic substance catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	86	142

External Links

No external refs found!

Brara.I03146.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation