Brara.I03146.1


Description : transcription factor *(DOF)


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I03146.1
Cluster HCAA Clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
29563 No alias OBF binding protein 4 0.02 Orthogroups_2024-Update
29617 No alias Dof-type zinc finger DNA-binding family protein 0.06 Orthogroups_2024-Update
89924 No alias cycling DOF factor 1 0.03 Orthogroups_2024-Update
A4A49_12086 No alias cyclic dof factor 2 0.05 Orthogroups_2024-Update
At3g47500 No alias Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3] 0.03 Orthogroups_2024-Update
At5g62430 No alias Cyclic dof factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1E3] 0.03 Orthogroups_2024-Update
Bradi2g09720 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
GRMZM2G134545 No alias TARGET OF MONOPTEROS 6 0.03 Orthogroups_2024-Update
Glyma.05G025900 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
Glyma.11G059300 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
Glyma.13G237500 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.13G241900 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.15G071400 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.19G257500 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
Glyma.20G035200 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
HORVU2Hr1G017290.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Potri.004G121800 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Potri.008G087800 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Potri.017G084600 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Potri.019G040700 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
Pp1s124_139V6 No alias zinc finger 0.03 Orthogroups_2024-Update
Pp1s18_64V6 No alias No description available 0.03 Orthogroups_2024-Update
Pp1s351_46V6 No alias zinc finger 0.02 Orthogroups_2024-Update
Pp1s69_113V6 No alias zinc finger 0.05 Orthogroups_2024-Update
Seita.9G259300.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Seita.9G525000.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Solyc02g067230 No alias Dof zinc finger protein3 0.05 Orthogroups_2024-Update
Solyc02g090220 No alias Zinc finger, Dof-type (AHRD V3.3 *** A0A124SC40_CYNCS) 0.03 Orthogroups_2024-Update
Solyc05g007880 No alias Dof zinc finger protein (AHRD V3.3 *** W9S8B0_9ROSA) 0.05 Orthogroups_2024-Update
Sopen02g016410 No alias Dof domain, zinc finger 0.06 Orthogroups_2024-Update
Sopen02g023480 No alias Dof domain, zinc finger 0.04 Orthogroups_2024-Update
Sopen05g003730 No alias Dof domain, zinc finger 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0008285 negative regulation of cell proliferation IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
BP GO:0042127 regulation of cell proliferation IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 86 142
No external refs found!