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Description : Unknown function
Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.I03147.1 | |
| Cluster | HCAA Clusters: Cluster_394 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At1g74620 | No alias | Putative RING zinc finger protein; 84572-85321... | 0.03 | Orthogroups_2024-Update | |
| Bradi1g35540 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Bradi3g37800 | No alias | RING/U-box superfamily protein | 0.01 | Orthogroups_2024-Update | |
| Brara.C03342.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G164358 | No alias | RING-H2 finger C1A | 0.03 | Orthogroups_2024-Update | |
| LOC_Os02g09820 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os03g26420 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os05g41520 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os09g17610 | No alias | RING finger protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os12g04450 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os12g04660 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_79051g0010 | No alias | (at3g19950 : 171.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| Potri.005G062400 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Seita.1G332400.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.005G165900.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sopen01g012080 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
| Sopen03g029300 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
| Sopen11g007740 | No alias | Ring finger domain | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003885 | D-arabinono-1,4-lactone oxidase activity | IEP | Predicted GO |
| MF | GO:0004866 | endopeptidase inhibitor activity | IEP | Predicted GO |
| BP | GO:0010215 | cellulose microfibril organization | IEP | Predicted GO |
| MF | GO:0016899 | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | IEP | Predicted GO |
| BP | GO:0030198 | extracellular matrix organization | IEP | Predicted GO |
| MF | GO:0030414 | peptidase inhibitor activity | IEP | Predicted GO |
| BP | GO:0043062 | extracellular structure organization | IEP | Predicted GO |
| MF | GO:0061134 | peptidase regulator activity | IEP | Predicted GO |
| MF | GO:0061135 | endopeptidase regulator activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 44 | 67 |
| No external refs found! |