Brara.I03165.1

Description : HD-ZIP I/II-type transcription factor

Gene families : OG_42_0000105 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.I03165.1
Cluster	HCAA Clusters: Cluster_96

Target	Alias	Description	ECC score	Gene Family Method
19476	No alias	homeobox 1	0.02	Orthogroups_2024-Update
81609	No alias	homeobox protein 16	0.04	Orthogroups_2024-Update
A4A49_41574	No alias	homeobox-leucine zipper protein hox21	0.03	Orthogroups_2024-Update
At4g36740	No alias	homeobox protein 40 [Source:TAIR;Acc:AT4G36740]	0.04	Orthogroups_2024-Update
Bradi3g56180	No alias	homeobox 1	0.02	Orthogroups_2024-Update
Brara.A00197.1	No alias	HD-ZIP I/II-type transcription factor	0.05	Orthogroups_2024-Update
Brara.C00130.1	No alias	regulatory protein *(LMI1) of floral meristem identity...	0.03	Orthogroups_2024-Update
Brara.D00081.1	No alias	HD-ZIP I/II-type transcription factor	0.04	Orthogroups_2024-Update
Brara.E03658.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.G01237.1	No alias	HD-ZIP I/II-type transcription factor	0.04	Orthogroups_2024-Update
Glyma.02G022300	No alias	homeobox 1	0.03	Orthogroups_2024-Update
Glyma.11G242200	No alias	homeobox protein 6	0.06	Orthogroups_2024-Update
Glyma.19G189700	No alias	homeobox 51	0.03	Orthogroups_2024-Update
HORVU2Hr1G092710.2	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
LOC_Os03g07450	No alias	homeobox associated leucine zipper, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os09g29460	No alias	homeobox associated leucine zipper, putative, expressed	0.03	Orthogroups_2024-Update
MA_441783g0010	No alias	(at1g69780 : 97.8) Encodes a homeodomain leucine zipper...	0.03	Orthogroups_2024-Update
Potri.006G117700	No alias	homeobox 51	0.03	Orthogroups_2024-Update
Potri.012G023700	No alias	homeobox 7	0.02	Orthogroups_2024-Update
Pp1s154_145V6	No alias	af402605_1homeodomain leucine zipper protein hdz2	0.03	Orthogroups_2024-Update
Pp1s28_54V6	No alias	af402605_1homeodomain leucine zipper protein hdz2	0.04	Orthogroups_2024-Update
Pp1s31_96V6	No alias	dna-binding protein	0.02	Orthogroups_2024-Update
Pp1s57_194V6	No alias	No description available	0.03	Orthogroups_2024-Update
Pp1s65_52V6	No alias	af402605_1homeodomain leucine zipper protein hdz2	0.02	Orthogroups_2024-Update
Pp1s77_184V6	No alias	No description available	0.03	Orthogroups_2024-Update
Seita.6G187700.1	No alias	HD-ZIP I/II-type transcription factor	0.05	Orthogroups_2024-Update
Seita.9G503700.1	No alias	HD-ZIP I/II-type transcription factor	0.02	Orthogroups_2024-Update
Solyc01g096320	No alias	Homeobox-leucine zipper protein (AHRD V3.3 *** M4W1Z7_TOBAC)	0.03	Orthogroups_2024-Update
Solyc02g062960	No alias	Homeobox-leucine zipper family protein (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc04g005800	No alias	Homeobox leucine zipper family protein (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update
Solyc05g006980	No alias	Homeobox leucine zipper family protein (AHRD V3.3 ***...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0016020	membrane	IEP	Predicted GO
CC	GO:0019867	outer membrane	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	Predicted GO
MF	GO:0042887	amide transmembrane transporter activity	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:1904680	peptide transmembrane transporter activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	68	121
IPR003106	Leu_zip_homeo	123	165

External Links

No external refs found!

Brara.I03165.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation