- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : E3 ubiquitin ligase *(XBAT3)
Gene families : OG_42_0002412 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002412_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.I03199.1 | |
| Cluster | HCAA Clusters: Cluster_186 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Brara.G00516.1 | No alias | E3 ubiquitin ligase *(XBAT3) | 0.05 | Orthogroups_2024-Update | |
| Potri.005G225300 | No alias | XB3 ortholog 5 in Arabidopsis thaliana | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | 16Dec |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000145 | exocyst | IEP | Predicted GO |
| MF | GO:0003779 | actin binding | IEP | Predicted GO |
| MF | GO:0004843 | thiol-dependent ubiquitin-specific protease activity | IEP | Predicted GO |
| MF | GO:0005546 | phosphatidylinositol-4,5-bisphosphate binding | IEP | Predicted GO |
| BP | GO:0006887 | exocytosis | IEP | Predicted GO |
| BP | GO:0016579 | protein deubiquitination | IEP | Predicted GO |
| MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Predicted GO |
| BP | GO:0032940 | secretion by cell | IEP | Predicted GO |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | Predicted GO |
| MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Predicted GO |
| CC | GO:0044448 | cell cortex part | IEP | Predicted GO |
| BP | GO:0046903 | secretion | IEP | Predicted GO |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Predicted GO |
| CC | GO:0099023 | tethering complex | IEP | Predicted GO |
| MF | GO:0101005 | ubiquitinyl hydrolase activity | IEP | Predicted GO |
| MF | GO:1901981 | phosphatidylinositol phosphate binding | IEP | Predicted GO |
| MF | GO:1902936 | phosphatidylinositol bisphosphate binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002110 | Ankyrin_rpt | 69 | 125 |
| No external refs found! |