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  5. Brara.I03213.1

Brara.I03213.1


Description : regulatory protein *(CORD) of cortical microtubule organisation


Gene families : OG_42_0007760 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007760_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I03213.1
Cluster HCAA Clusters: Cluster_305

Target Alias Description ECC score Gene Family Method Actions
At1g23790 No alias At1g23790 [Source:UniProtKB/TrEMBL;Acc:Q9ZUB7] 0.04 Orthogroups_2024-Update
Glyma.01G031300 No alias Plant protein of unknown function (DUF936) 0.06 Orthogroups_2024-Update
Glyma.02G034500 No alias Plant protein of unknown function (DUF936) 0.06 Orthogroups_2024-Update
MA_134781g0010 No alias (at1g23790 : 254.0) Plant protein of unknown function... 0.03 Orthogroups_2024-Update
PSME_00038806-RA No alias (at1g23790 : 238.0) Plant protein of unknown function... 0.02 Orthogroups_2024-Update
Solyc05g005580 No alias DUF936 family protein (AHRD V3.3 *** G7K1E3_MEDTR) 0.12 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
InterPro domains Description Start Stop
IPR010341 DUF936_pln 385 464
IPR010341 DUF936_pln 4 276
IPR010341 DUF936_pln 208 392
No external refs found!