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  5. Brara.I03226.1

Brara.I03226.1


Description : EC_2.4 glycosyltransferase & mannan synthase *(CSLA)


Gene families : OG_42_0000129 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I03226.1
Cluster HCAA Clusters: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
At3g07330 No alias Probable xyloglucan glycosyltransferase 6... 0.03 Orthogroups_2024-Update
Bradi1g07277 No alias Cellulose-synthase-like C12 0.02 Orthogroups_2024-Update
Bradi2g50967 No alias Cellulose-synthase-like C12 0.04 Orthogroups_2024-Update
Glyma.13G070300 No alias Cellulose-synthase-like C4 0.03 Orthogroups_2024-Update
Glyma.14G090000 No alias Cellulose-synthase-like C12 0.03 Orthogroups_2024-Update
LOC_Os02g51060 No alias CSLA6 - cellulose synthase-like family A; mannan... 0.03 Orthogroups_2024-Update
PSME_00004636-RA No alias (at5g03760 : 500.0) encodes a beta-mannan synthase that... 0.01 Orthogroups_2024-Update
PSME_00046896-RA No alias (at4g07960 : 830.0) encodes a gene similar to cellulose... 0.02 Orthogroups_2024-Update
Pp1s15_115V6 No alias cellulose synthase-like glycosyltransferase family 2 0.02 Orthogroups_2024-Update
Pp1s164_5V6 No alias cellulose synthase-like glycosyltransferase family 2 0.03 Orthogroups_2024-Update
Pp1s36_214V6 No alias cellulose synthase-like A3, glycosyltransferase family 2... 0.02 Orthogroups_2024-Update
Pp1s65_194V6 No alias cellulose synthase-like A1, glycosyltransferase family 2... 0.02 Orthogroups_2024-Update
Seita.2G211800.1 No alias 1,4-beta-glucan synthase *(CSLC) & EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
Sobic.010G093500.2 No alias EC_2.4 glycosyltransferase & mannan synthase *(CSLA) 0.02 Orthogroups_2024-Update
Solyc02g089640 No alias cellulose-synthase-like 0.03 Orthogroups_2024-Update
Sopen09g021080 No alias Glycosyltransferase like family 2 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0007031 peroxisome organization IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001173 Glyco_trans_2-like 213 420
No external refs found!