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  5. Brara.I03248.1

Brara.I03248.1


Description : component *(uL15) of large ribosomal-subunit (LSU) proteome


Gene families : OG_42_0002371 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002371_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.I03248.1
Cluster HCAA Clusters: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
165371 No alias Ribosomal protein L18e/L15 superfamily protein 0.04 Orthogroups_2024-Update
A4A49_03476 No alias 60s ribosomal protein l27a-3 0.06 Orthogroups_2024-Update
Bradi1g21630 No alias Ribosomal protein L18e/L15 superfamily protein 0.03 Orthogroups_2024-Update
Brara.B01921.1 No alias component *(uL15) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.G00984.1 No alias component *(uL15) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.H02216.1 No alias component *(uL15) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Cre02.g115200 No alias Ribosomal protein L18e/L15 superfamily protein 0.04 Orthogroups_2024-Update
Glyma.01G026100 No alias Ribosomal protein L18e/L15 superfamily protein 0.04 Orthogroups_2024-Update
Glyma.02G038700 No alias Ribosomal protein L18e/L15 superfamily protein 0.03 Orthogroups_2024-Update
Glyma.04G187500 No alias Ribosomal protein L18e/L15 superfamily protein 0.04 Orthogroups_2024-Update
Glyma.05G040900 No alias Ribosomal protein L18e/L15 superfamily protein 0.04 Orthogroups_2024-Update
Glyma.17G085400 No alias Ribosomal protein L18e/L15 superfamily protein 0.1 Orthogroups_2024-Update
LOC_Os03g29460 No alias 60S ribosomal protein, putative, expressed 0.04 Orthogroups_2024-Update
Mp5g00120.1 No alias component RPL27a of LSU proteome component 0.03 Orthogroups_2024-Update
Potri.016G069000 No alias Ribosomal protein L18e/L15 superfamily protein 0.04 Orthogroups_2024-Update
Pp1s400_20V6 No alias 60s ribosomal protein 0.07 Orthogroups_2024-Update
Pp1s4_178V6 No alias F24J13.17; 60S ribosomal protein L27A (RPL27aC)... 0.06 Orthogroups_2024-Update
Pp1s57_180V6 No alias F24J13.17; 60S ribosomal protein L27A (RPL27aC)... 0.03 Orthogroups_2024-Update
Pp1s77_266V6 No alias 60s ribosomal protein 0.09 Orthogroups_2024-Update
Pp1s8_10V6 No alias 60s ribosomal protein 0.08 Orthogroups_2024-Update
Seita.1G073500.1 No alias component *(uL15) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Seita.2G387500.1 No alias component *(uL15) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Sobic.002G372400.1 No alias component *(uL15) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Sobic.004G055100.1 No alias component *(uL15) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Solyc03g112360 No alias 60S ribosomal protein L27A (AHRD V3.3 *** B6VC54_VERFO) 0.09 Orthogroups_2024-Update
Sopen03g031460 No alias Ribosomal protein L18e/L15 0.08 Orthogroups_2024-Update
evm.model.contig_4432.8 No alias (at1g70600 : 218.0) Ribosomal protein L18e/L15... 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006553 lysine metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009085 lysine biosynthetic process IEP Predicted GO
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046451 diaminopimelate metabolic process IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 28 143
No external refs found!