Brara.I03254.1


Description : class-B endo-1,4-beta-glucanase


Gene families : OG_42_0000077 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I03254.1
Cluster HCAA Clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
A4A49_19880 No alias endoglucanase 8 0.04 Orthogroups_2024-Update
At1g19940 No alias Endoglucanase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXI9] 0.03 Orthogroups_2024-Update
At1g22880 No alias Endoglucanase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q2V4L8] 0.02 Orthogroups_2024-Update
At2g44570 No alias Endoglucanase 15 [Source:UniProtKB/Swiss-Prot;Acc:O80497] 0.03 Orthogroups_2024-Update
At4g11050 No alias Endoglucanase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7I0] 0.03 Orthogroups_2024-Update
At4g38990 No alias Endoglucanase 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVJ4] 0.03 Orthogroups_2024-Update
Bradi1g54580 No alias cellulase 2 0.02 Orthogroups_2024-Update
Bradi2g11870 No alias glycosyl hydrolase 9B13 0.04 Orthogroups_2024-Update
Bradi3g57190 No alias glycosyl hydrolase 9A4 0.02 Orthogroups_2024-Update
Bradi4g29640 No alias glycosyl hydrolase 9B8 0.03 Orthogroups_2024-Update
Bradi4g35970 No alias glycosyl hydrolase 9B18 0.04 Orthogroups_2024-Update
Bradi5g26010 No alias glycosyl hydrolase 9C1 0.03 Orthogroups_2024-Update
Brara.E01094.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.G03367.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I01325.1 No alias class-C endo-1,4-beta-glucanase 0.04 Orthogroups_2024-Update
Brara.I05558.1 No alias class-B endo-1,4-beta-glucanase 0.03 Orthogroups_2024-Update
Glyma.05G236400 No alias glycosyl hydrolase 9B1 0.03 Orthogroups_2024-Update
Glyma.06G008200 No alias glycosyl hydrolase 9B18 0.02 Orthogroups_2024-Update
Glyma.06G056900 No alias glycosyl hydrolase 9A4 0.04 Orthogroups_2024-Update
Glyma.09G231800 No alias glycosyl hydrolase 9B1 0.04 Orthogroups_2024-Update
Glyma.18G030700 No alias cellulase 2 0.03 Orthogroups_2024-Update
LOC_Os05g03840 No alias endoglucanase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g29770 No alias endoglucanase, putative, expressed 0.03 Orthogroups_2024-Update
MA_10430521g0010 No alias (at3g43860 : 535.0) glycosyl hydrolase 9A4 (GH9A4);... 0.06 Orthogroups_2024-Update
MA_10437098g0010 No alias (at4g11050 : 708.0) glycosyl hydrolase 9C3 (GH9C3);... 0.02 Orthogroups_2024-Update
MA_195523g0010 No alias (at3g43860 : 298.0) glycosyl hydrolase 9A4 (GH9A4);... 0.03 Orthogroups_2024-Update
PSME_00006676-RA No alias (at4g02290 : 363.0) glycosyl hydrolase 9B13 (GH9B13);... 0.01 Orthogroups_2024-Update
PSME_00007066-RA No alias (at1g02800 : 663.0) Encodes a protein with similarity to... 0.02 Orthogroups_2024-Update
PSME_00008851-RA No alias (at1g64390 : 781.0) glycosyl hydrolase 9C2 (GH9C2);... 0.04 Orthogroups_2024-Update
PSME_00009215-RA No alias (at1g02800 : 490.0) Encodes a protein with similarity to... 0.03 Orthogroups_2024-Update
PSME_00013360-RA No alias (at1g02800 : 658.0) Encodes a protein with similarity to... 0.03 Orthogroups_2024-Update
PSME_00016234-RA No alias (at1g70710 : 674.0) endo-1,4-beta-glucanase. Involved in... 0.03 Orthogroups_2024-Update
PSME_00024924-RA No alias (at4g02290 : 664.0) glycosyl hydrolase 9B13 (GH9B13);... 0.03 Orthogroups_2024-Update
PSME_00029529-RA No alias (at1g64390 : 682.0) glycosyl hydrolase 9C2 (GH9C2);... 0.02 Orthogroups_2024-Update
PSME_00036164-RA No alias (at1g48930 : 712.0) glycosyl hydrolase 9C1 (GH9C1);... 0.02 Orthogroups_2024-Update
Potri.001G083200 No alias cellulase 2 0.03 Orthogroups_2024-Update
Potri.001G098800 No alias glycosyl hydrolase 9B14 0.04 Orthogroups_2024-Update
Potri.002G023900 No alias glycosyl hydrolase 9B5 0.02 Orthogroups_2024-Update
Potri.003G147600 No alias cellulase 2 0.04 Orthogroups_2024-Update
Potri.008G132700 No alias glycosyl hydrolase 9B1 0.03 Orthogroups_2024-Update
Potri.014G126900 No alias glycosyl hydrolase 9B13 0.03 Orthogroups_2024-Update
Potri.015G127900 No alias glycosyl hydrolase 9B6 0.06 Orthogroups_2024-Update
Pp1s100_139V6 No alias endo-beta- -glucanase 0.03 Orthogroups_2024-Update
Pp1s149_10V6 No alias endo-beta- -glucanase 0.02 Orthogroups_2024-Update
Pp1s376_19V6 No alias endo-beta- -glucanase 0.03 Orthogroups_2024-Update
Seita.1G086900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G284400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.3G050200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.003G148500.1 No alias class-B endo-1,4-beta-glucanase 0.03 Orthogroups_2024-Update
Sobic.004G021400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G244600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G119300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.009G029800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc07g049300 No alias Endoglucanase (AHRD V3.3 *** M0ZJ27_SOLTU) 0.02 Orthogroups_2024-Update
Solyc08g081620 No alias LEU13054 endo-1,4-beta-glucanase precursor 0.03 Orthogroups_2024-Update
Solyc11g040340 No alias LEE14BDGL L.esculentum endo-1,4-beta-D-glucanase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004146 dihydrofolate reductase activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0008200 ion channel inhibitor activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Predicted GO
BP GO:0009611 response to wounding IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
MF GO:0016247 channel regulator activity IEP Predicted GO
MF GO:0016248 channel inhibitor activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0017080 sodium channel regulator activity IEP Predicted GO
MF GO:0019871 sodium channel inhibitor activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Predicted GO
BP GO:0046653 tetrahydrofolate metabolic process IEP Predicted GO
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
MF GO:0099106 ion channel regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 34 487
No external refs found!