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  5. Brara.I03256.1

Brara.I03256.1


Description : EC_3.1 hydrolase acting on ester bond & pectin methylesterase


Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I03256.1
Cluster HCAA Clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
A4A49_03154 No alias putative pectinesterasepectinesterase inhibitor 60 0.03 Orthogroups_2024-Update
A4A49_03834 No alias putative pectinesterasepectinesterase inhibitor 61 0.03 Orthogroups_2024-Update
A4A49_33399 No alias putative pectinesterasepectinesterase inhibitor 58 0.03 Orthogroups_2024-Update
At1g11580 No alias methylesterase PCR A [Source:TAIR;Acc:AT1G11580] 0.04 Orthogroups_2024-Update
At1g53830 No alias Pectinesterase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q42534] 0.02 Orthogroups_2024-Update
At3g06830 No alias Probable pectinesterase/pectinesterase inhibitor 23... 0.03 Orthogroups_2024-Update
At3g43270 No alias Probable pectinesterase/pectinesterase inhibitor 32... 0.04 Orthogroups_2024-Update
At5g49180 No alias Pectinesterase [Source:UniProtKB/TrEMBL;Acc:A0A178UKT8] 0.04 Orthogroups_2024-Update
Bradi1g17940 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 Orthogroups_2024-Update
Brara.A00470.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.E00332.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.04 Orthogroups_2024-Update
Brara.E00487.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G043415 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Orthogroups_2024-Update
Glyma.01G138000 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Glyma.01G138100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Glyma.02G008400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.03G029400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Orthogroups_2024-Update
Glyma.04G236200 No alias pectin methylesterase PCR fragment F 0.03 Orthogroups_2024-Update
Glyma.09G042100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.05 Orthogroups_2024-Update
Glyma.09G042200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.10G017100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.15G183700 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.05 Orthogroups_2024-Update
Glyma.17G028600 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
HORVU4Hr1G054860.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.02 Orthogroups_2024-Update
LOC_Os01g21034 No alias pectinesterase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g26360 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10435891g0010 No alias (o04887|pme2_citsi : 389.0) Pectinesterase-2 precursor... 0.04 Orthogroups_2024-Update
MA_130858g0010 No alias (at5g53370 : 416.0) pectin methylesterase PCR fragment F... 0.03 Orthogroups_2024-Update
MA_177306g0010 No alias (o04886|pme1_citsi : 483.0) Pectinesterase-1 precursor... 0.02 Orthogroups_2024-Update
PSME_00003000-RA No alias (at1g53830 : 495.0) encodes a pectin methylesterase;... 0.02 Orthogroups_2024-Update
PSME_00022513-RA No alias (p83948|pme3_citsi : 479.0) Pectinesterase-3 precursor... 0.02 Orthogroups_2024-Update
PSME_00025865-RA No alias (at5g53370 : 368.0) pectin methylesterase PCR fragment F... 0.03 Orthogroups_2024-Update
PSME_00029101-RA No alias (at1g53830 : 536.0) encodes a pectin methylesterase;... 0.04 Orthogroups_2024-Update
PSME_00033188-RA No alias (at5g53370 : 514.0) pectin methylesterase PCR fragment F... 0.04 Orthogroups_2024-Update
PSME_00038239-RA No alias (at3g49220 : 547.0) Plant invertase/pectin... 0.03 Orthogroups_2024-Update
PSME_00038370-RA No alias (o04887|pme2_citsi : 476.0) Pectinesterase-2 precursor... 0.03 Orthogroups_2024-Update
PSME_00043969-RA No alias (at1g53830 : 497.0) encodes a pectin methylesterase;... 0.03 Orthogroups_2024-Update
PSME_00048380-RA No alias (at4g02330 : 476.0) ATPMEPCRB; FUNCTIONS IN:... 0.04 Orthogroups_2024-Update
PSME_00056054-RA No alias (at4g02330 : 471.0) ATPMEPCRB; FUNCTIONS IN:... 0.01 Orthogroups_2024-Update
Potri.001G162500 No alias pectin methylesterase 3 0.03 Orthogroups_2024-Update
Potri.006G134700 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Orthogroups_2024-Update
Potri.011G135000 No alias methylesterase PCR A 0.05 Orthogroups_2024-Update
Pp1s258_34V6 No alias Pectinesterase-2 precursor (Pectin methylesterase) (PE)... 0.02 Orthogroups_2024-Update
Seita.1G129700.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.02 Orthogroups_2024-Update
Seita.2G441400.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Seita.3G370800.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Seita.5G344400.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Seita.6G168500.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Seita.7G123200.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Seita.9G434800.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Sobic.002G210700.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.02 Orthogroups_2024-Update
Sobic.007G146300.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.02 Orthogroups_2024-Update
Solyc01g099940 No alias Pectinesterase (AHRD V3.3 *** K4B128_SOLLC) 0.02 Orthogroups_2024-Update
Solyc03g123630 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Solyc05g047590 No alias Sl Pectinesterase 0.04 Orthogroups_2024-Update
Solyc06g009190 No alias Pectinesterase (AHRD V3.3 *** K4C3U9_SOLLC) 0.03 Orthogroups_2024-Update
Sopen01g021780 No alias Pectinesterase 0.03 Orthogroups_2024-Update
Sopen02g024920 No alias Pectinesterase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA 16Dec
MF GO:0030599 pectinesterase activity IEA 16Dec
BP GO:0042545 cell wall modification IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 245 535
IPR006501 Pectinesterase_inhib_dom 32 178
No external refs found!