Brara.I03267.1

Description : E3 ubiquitin ligase

Gene families : OG_42_0000634 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000634_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.I03267.1
Cluster	HCAA Clusters: Cluster_89

Target	Alias	Description	ECC score	Gene Family Method
At1g23030	No alias	RING-type E3 ubiquitin transferase...	0.09	Orthogroups_2024-Update
At1g71020	No alias	RING-type E3 ubiquitin transferase...	0.03	Orthogroups_2024-Update
Bradi3g38610	No alias	Plant U-Box 15	0.02	Orthogroups_2024-Update
Bradi4g22590	No alias	plant U-box 13	0.02	Orthogroups_2024-Update
Mp5g12550.1	No alias	U-box domain-containing protein 13 OS=Arabidopsis...	0.02	Orthogroups_2024-Update
Potri.001G238500	No alias	plant U-box 13	0.03	Orthogroups_2024-Update
Seita.1G309100.1	No alias	E3 ubiquitin ligase	0.05	Orthogroups_2024-Update
Solyc04g007640	No alias	U-box domain-containing protein 10 (AHRD V3.3 ***...	0.05	Orthogroups_2024-Update
Solyc12g094610	No alias	U-box domain-containing 15-like protein (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update
Sopen12g031510	No alias	Armadillo/beta-catenin-like repeat	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	16Dec
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	16Dec
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004420	hydroxymethylglutaryl-CoA reductase (NADPH) activity	IEP	Predicted GO
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Predicted GO
MF	GO:0005094	Rho GDP-dissociation inhibitor activity	IEP	Predicted GO
MF	GO:0005244	voltage-gated ion channel activity	IEP	Predicted GO
MF	GO:0005247	voltage-gated chloride channel activity	IEP	Predicted GO
MF	GO:0005253	anion channel activity	IEP	Predicted GO
MF	GO:0005254	chloride channel activity	IEP	Predicted GO
BP	GO:0005975	carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0005984	disaccharide metabolic process	IEP	Predicted GO
BP	GO:0005991	trehalose metabolic process	IEP	Predicted GO
BP	GO:0005992	trehalose biosynthetic process	IEP	Predicted GO
BP	GO:0006821	chloride transport	IEP	Predicted GO
BP	GO:0007165	signal transduction	IEP	Predicted GO
BP	GO:0007264	small GTPase mediated signal transduction	IEP	Predicted GO
BP	GO:0007265	Ras protein signal transduction	IEP	Predicted GO
BP	GO:0007266	Rho protein signal transduction	IEP	Predicted GO
MF	GO:0008289	lipid binding	IEP	Predicted GO
MF	GO:0008308	voltage-gated anion channel activity	IEP	Predicted GO
MF	GO:0008509	anion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0009311	oligosaccharide metabolic process	IEP	Predicted GO
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Predicted GO
BP	GO:0010215	cellulose microfibril organization	IEP	Predicted GO
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015108	chloride transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015267	channel activity	IEP	Predicted GO
BP	GO:0015698	inorganic anion transport	IEP	Predicted GO
BP	GO:0015936	coenzyme A metabolic process	IEP	Predicted GO
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Predicted GO
MF	GO:0022803	passive transmembrane transporter activity	IEP	Predicted GO
MF	GO:0022832	voltage-gated channel activity	IEP	Predicted GO
BP	GO:0030198	extracellular matrix organization	IEP	Predicted GO
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Predicted GO
BP	GO:0035556	intracellular signal transduction	IEP	Predicted GO
BP	GO:0043062	extracellular structure organization	IEP	Predicted GO
BP	GO:0046351	disaccharide biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	238	309
IPR000225	Armadillo	442	480
IPR000225	Armadillo	360	398

External Links

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Brara.I03267.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation