Brara.I03405.1

Description : cyclin-dependent kinase inhibitor *(KRP/ICK)

Gene families : OG_42_0000894 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000894_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.I03405.1
Cluster	HCAA Clusters: Cluster_139

Target	Alias	Description	ECC score	Gene Family Method	Actions
At2g32710	No alias	Cyclin-dependent kinase inhibitor 4...	0.06	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004857	enzyme inhibitor activity	None	Extended
MF	GO:0004860	protein kinase inhibitor activity	None	Extended
MF	GO:0004861	cyclin-dependent protein serine/threonine kinase inhibitor activity	IEA	16Dec
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	None	Extended
MF	GO:0019207	kinase regulator activity	None	Extended
MF	GO:0019210	kinase inhibitor activity	None	Extended
MF	GO:0019887	protein kinase regulator activity	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030291	protein serine/threonine kinase inhibitor activity	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051726	regulation of cell cycle	IEA	16Dec
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0098772	molecular function regulator	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000123	histone acetyltransferase complex	IEP	Predicted GO
MF	GO:0004751	ribose-5-phosphate isomerase activity	IEP	Predicted GO
MF	GO:0005048	signal sequence binding	IEP	Predicted GO
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Predicted GO
BP	GO:0006354	DNA-templated transcription, elongation	IEP	Predicted GO
BP	GO:0006368	transcription elongation from RNA polymerase II promoter	IEP	Predicted GO
BP	GO:0006476	protein deacetylation	IEP	Predicted GO
BP	GO:0006621	protein retention in ER lumen	IEP	Predicted GO
BP	GO:0006801	superoxide metabolic process	IEP	Predicted GO
CC	GO:0008023	transcription elongation factor complex	IEP	Predicted GO
BP	GO:0009052	pentose-phosphate shunt, non-oxidative branch	IEP	Predicted GO
BP	GO:0016575	histone deacetylation	IEP	Predicted GO
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Predicted GO
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Predicted GO
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Predicted GO
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Predicted GO
CC	GO:0031248	protein acetyltransferase complex	IEP	Predicted GO
BP	GO:0032507	maintenance of protein location in cell	IEP	Predicted GO
BP	GO:0035437	maintenance of protein localization in endoplasmic reticulum	IEP	Predicted GO
BP	GO:0035601	protein deacylation	IEP	Predicted GO
MF	GO:0042277	peptide binding	IEP	Predicted GO
CC	GO:0044451	nucleoplasm part	IEP	Predicted GO
BP	GO:0045185	maintenance of protein location	IEP	Predicted GO
MF	GO:0046923	ER retention sequence binding	IEP	Predicted GO
MF	GO:0051287	NAD binding	IEP	Predicted GO
BP	GO:0051651	maintenance of location in cell	IEP	Predicted GO
CC	GO:0070449	elongin complex	IEP	Predicted GO
CC	GO:0070461	SAGA-type complex	IEP	Predicted GO
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Predicted GO
BP	GO:0072595	maintenance of protein localization in organelle	IEP	Predicted GO
BP	GO:0098732	macromolecule deacylation	IEP	Predicted GO
CC	GO:1902493	acetyltransferase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003175	CDI	119	166

External Links

No external refs found!

Brara.I03405.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation