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  5. Brara.I03408.1

Brara.I03408.1


Description : C2H2 subclass IDD transcription factor


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.I03408.1
Cluster HCAA Clusters: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
A4A49_19905 No alias zinc finger protein magpie 0.03 Orthogroups_2024-Update
A4A49_23823 No alias zinc finger protein magpie 0.02 Orthogroups_2024-Update
MA_12028g0010 No alias (at2g01940 : 315.0) May be involved in an early event in... 0.04 Orthogroups_2024-Update
Pp1s165_3V6 No alias nucleic acid binding 0.02 Orthogroups_2024-Update
Pp1s218_34V6 No alias nucleic acid binding 0.03 Orthogroups_2024-Update
evm.model.contig_2090.3 No alias (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004605 phosphatidate cytidylyltransferase activity IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0006655 phosphatidylglycerol biosynthetic process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0032048 cardiolipin metabolic process IEP Predicted GO
BP GO:0032049 cardiolipin biosynthetic process IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046471 phosphatidylglycerol metabolic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
MF GO:0070567 cytidylyltransferase activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!