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  5. Brara.I03560.1

Brara.I03560.1


Description : strigolactone signal modulator *(SMXL)


Gene families : OG_42_0000981 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000981_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I03560.1
Cluster HCAA Clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
A4A49_07765 No alias protein smax1-like 3 0.05 Orthogroups_2024-Update
A4A49_27780 No alias protein smax1-like 3 0.04 Orthogroups_2024-Update
HORVU2Hr1G073780.5 No alias strigolactone signal modulator *(SMXL) 0.02 Orthogroups_2024-Update
PSME_00007617-RA No alias (at3g52490 : 246.0) Double Clp-N motif-containing P-loop... 0.03 Orthogroups_2024-Update
Potri.010G241600 No alias Double Clp-N motif-containing P-loop nucleoside... 0.03 Orthogroups_2024-Update
Seita.7G093900.1 No alias strigolactone signal modulator *(SMXL) 0.02 Orthogroups_2024-Update
Solyc01g007260 No alias Double Clp-N motif-containing P-loop nucleoside... 0.04 Orthogroups_2024-Update
Solyc07g018070 No alias Double Clp-N motif-containing P-loop nucleoside... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR004176 Clp_N 131 168
IPR004176 Clp_N 26 53
No external refs found!