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  5. Brara.I03598.1

Brara.I03598.1


Description : substrate adaptor of SCF E3 ubiquitin ligase complex


Gene families : OG_42_0000800 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000800_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.I03598.1
Cluster HCAA Clusters: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
At1g12710 No alias phloem protein 2-A12 [Source:TAIR;Acc:AT1G12710] 0.03 Orthogroups_2024-Update
At3g53000 No alias F-box protein PP2-A15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF92] 0.05 Orthogroups_2024-Update
At3g61060 No alias Phloem protein 2-A13 [Source:UniProtKB/TrEMBL;Acc:F4JD33] 0.03 Orthogroups_2024-Update
Bradi3g31520 No alias phloem protein 2-A13 0.04 Orthogroups_2024-Update
Brara.F00840.1 No alias substrate adaptor of SCF E3 ubiquitin ligase complex 0.04 Orthogroups_2024-Update
Brara.I01211.1 No alias substrate adaptor of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
GRMZM2G402881 No alias phloem protein 2-A13 0.02 Orthogroups_2024-Update
Glyma.05G049400 No alias phloem protein 2-A12 0.03 Orthogroups_2024-Update
Glyma.10G064800 No alias phloem protein 2-A15 0.04 Orthogroups_2024-Update
Glyma.16G197800 No alias phloem protein 2-A13 0.03 Orthogroups_2024-Update
Glyma.20G155700 No alias phloem protein 2-A13 0.03 Orthogroups_2024-Update
LOC_Os09g35680 No alias OsFBX339 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
Solyc03g026160 No alias LOW QUALITY:Unknown protein (AHRD V3.3 ) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR025886 PP2-like 116 285
No external refs found!