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  5. Brara.I03613.1

Brara.I03613.1


Description : platform ATPase CDC48


Gene families : OG_42_0000328 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000328_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I03613.1
Cluster HCAA Clusters: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
Brara.E03061.1 No alias platform ATPase CDC48 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
MF GO:0016887 ATPase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR003338 CDC4_N-term_subdom 30 110
IPR004201 Cdc48_dom2 132 195
IPR003959 ATPase_AAA_core 518 651
IPR003959 ATPase_AAA_core 245 374
No external refs found!