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  5. Brara.I03693.1

Brara.I03693.1


Description : component *(bL17c) of large plastid ribosomal-subunit proteome


Gene families : OG_42_0005563 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005563_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.I03693.1
Cluster HCAA Clusters: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
A4A49_36556 No alias 50s ribosomal protein l17, chloroplastic 0.06 Orthogroups_2024-Update
At3g54210 No alias 50S ribosomal protein L17, chloroplastic... 0.03 Orthogroups_2024-Update
Bradi1g04130 No alias Ribosomal protein L17 family protein 0.08 Orthogroups_2024-Update
Cre02.g108850 No alias Ribosomal protein L17 family protein 0.12 Orthogroups_2024-Update
GRMZM2G108643 No alias Ribosomal protein L17 family protein 0.05 Orthogroups_2024-Update
HORVU5Hr1G111640.1 No alias component *(bL17c) of large plastid ribosomal-subunit proteome 0.07 Orthogroups_2024-Update
Kfl00372_0120 kfl00372_0120_v1.1 (at3g54210 : 186.0) Ribosomal protein L17 family... 0.08 Orthogroups_2024-Update
Potri.016G143100 No alias Ribosomal protein L17 family protein 0.03 Orthogroups_2024-Update
Pp1s74_265V6 No alias ribosomal protein l17-like protein 0.05 Orthogroups_2024-Update
Seita.9G039000.1 No alias component *(bL17c) of large plastid ribosomal-subunit proteome 0.09 Orthogroups_2024-Update
Sobic.001G040000.2 No alias component *(bL17c) of large plastid ribosomal-subunit proteome 0.1 Orthogroups_2024-Update
Solyc06g082750 No alias 50S ribosomal protein L17 (AHRD V3.3 *** A0A072UXJ8_MEDTR) 0.03 Orthogroups_2024-Update
Sopen06g034110 No alias Ribosomal protein L17 0.09 Orthogroups_2024-Update
evm.model.tig00000889.52 No alias (at3g54210 : 159.0) Ribosomal protein L17 family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0004655 porphobilinogen synthase activity IEP Predicted GO
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Predicted GO
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000456 Ribosomal_L17 112 208
No external refs found!